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Commits on Dec 15, 2025

• add dwi sbref to cubids apply (#486)

  tien-tong

  authored
  ca02180

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Commits on Dec 12, 2025

• Refactor: Standardize bold-specific file handling for events, sbref, and physio (#484)

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  tien-tong

  authored
  cc5ec7b

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• Fix df created by `cubids group` and `cubids validate` (#483)

  tien-tong

  authored
  95432f6

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Commits on Nov 24, 2025

• Bump actions/checkout from 5 to 6 (#482)

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  dependabot[bot]

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  c0587e6

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Commits on Nov 18, 2025

• Add parallel processing to `cubids apply` (#481)

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  tien-tong

  authored
  e722a67

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Commits on Oct 30, 2025

• Change variant renaming from "ObliquityTrue" -> "Oblique" and "ObliquityFalse" -> "Plumb" (#480)

  tien-tong

  authored
  e5bc1c9

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• Add parallelization to `cubids add-nifti-info` (#479)

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  tien-tong

  authored
  814e9b8

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Commits on Oct 29, 2025

• Add --n-cpus to parallize cubids validate --validation-scope subject and fix PARTICIPANT_ID_MISMATCH (#476)

  tien-tong

  authored
  cb326b4

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Commits on Oct 23, 2025

• Bump actions/setup-python from 5 to 6 (#464)

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  dependabot[bot]

  authored
  88934a6

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• Bump actions/checkout from 4 to 5 (#462)

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  dependabot[bot]

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  f6d349e

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Commits on Oct 14, 2025

• Add tip about using conda-forge channel to install deno (#458)

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  tsalo

  and

  tien-tong

  authored
  7c1f248

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Commits on Oct 13, 2025

• Update pybids requirement from <=0.19.0 to <=0.20.0 (#468)

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  dependabot[bot]

  and

  tien-tong

  authored
  b35039d

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• Update pandas requirement from <=2.2.3 to <=2.3.3 (#469)

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  dependabot[bot]

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  22b5a80

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Commits on Sep 15, 2025

• Fix M0 scan variant name inheritance (#466)

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  singlesp

  and

  cursoragent

  authored
  7ccac2a

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Commits on Apr 4, 2025

• Remove deprecated CLIs (#454)

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  tien-tong

  authored
  0be1b9a

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• Support array-type metadata fields in `cubids group` (#407)

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  tsalo

  authored
  f7e5af4

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• Add file collection metadata as array-type fields to JSONs (#445)

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  tsalo

  and

  singlesp

  authored
  edf7a94

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Commits on Apr 3, 2025

• Update numpy requirement from <=2.2.3 to <=2.2.4 (#453)

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  dependabot[bot]

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  6421c46

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Commits on Mar 10, 2025

• Update pybids requirement from <=0.18.1 to <=0.19.0 (#451)

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  dependabot[bot]

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  fa208b2

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Commits on Feb 28, 2025

• Strip p0 from all values (#447)

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  tsalo

  authored
  b172dd3

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Commits on Feb 26, 2025

• Bookend entity sets with datatype and acquisition entities (#442)

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  tsalo

  authored
  ebd46c3

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• Remove non-alphanumeric characters from variant values (#443)

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  tsalo

  authored
  41c80c4

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Commits on Feb 21, 2025

• Add "C" prefix to cluster values in variants (#438)

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  tsalo

  authored
  38c3ac2

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Commits on Feb 20, 2025

• Improve testing of command-line interfaces (#431)

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  tsalo

  authored
  df31e94

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• Fix NaN Handling during Clustering (#439)

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  tien-tong

  and

  tsalo

  authored
  52093aa

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Commits on Feb 18, 2025

• Use cluster number in non-dominant acquisition variant names (#432)

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  singlesp

  and

  tsalo

  authored
  bedcb63

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• Clarify handling of non-BIDS entities in entity sets (e.g., `fmap-epi`) (#435)

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  tsalo

  authored
  6e8726e

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Commits on Feb 17, 2025

• Update numpy requirement from <=2.2.2 to <=2.2.3 (#434)

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  dependabot[bot]

  authored
  1abbe98

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Commits on Feb 11, 2025

• Pass schema along to workflows #430

  tsalo

  authored
  014c352

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Commits on Feb 10, 2025

• cast None to string when adding ImageOrientation in add_nifti_info function (#428)

  ashleychari

  authored
  f144803

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Commits on Feb 5, 2025

• Use BIDS schema in CuBIDS (#392)

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  tsalo

  authored
  7650e19

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Commits on Feb 4, 2025

• Split out non-class methods into utils module (#419)

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  tsalo

  authored
  e3cbb64

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Commits on Jan 30, 2025

• Variant renaming suggestions are ignoring tolerances (#417)

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  mattcieslak

  and

  tsalo

  authored
  89792af

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Commits on Jan 28, 2025

• Remove `--container` argument from CLIs (#394)

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  tsalo

  and

  mattcieslak

  authored
  49d9e88

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Commits on Jan 27, 2025

• Add/edit cubids.py docstrings (#411)

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  3 peopleauthored
  46df25c

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