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183 stars written in Python
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This is an official implementation for "Video Swin Transformers".

Python 1,593 210 Updated Mar 8, 2023

Implementation of Alphafold 3 from Google Deepmind in Pytorch

Python 1,572 204 Updated Sep 18, 2025

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

Python 1,363 324 Updated May 2, 2025

⚡VoltaML is a lightweight library to convert and run your ML/DL deep learning models in high performance inference runtimes like TensorRT, TorchScript, ONNX and TVM.

Python 1,185 40 Updated Nov 30, 2022

Implementation A Style-Based Generator Architecture for Generative Adversarial Networks in PyTorch

Python 1,113 229 Updated Aug 26, 2021

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

Python 1,090 232 Updated Aug 21, 2025

Open source implementation of AlphaFold3

Python 1,019 86 Updated Oct 7, 2024
Python 937 109 Updated Jun 17, 2025

Making Protein Design accessible to all via Google Colab!

Python 838 202 Updated Oct 23, 2025

Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch

Python 799 104 Updated Oct 27, 2025

Working with molecular structures in pandas DataFrames

Python 740 117 Updated Aug 1, 2024

MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.

Python 700 162 Updated Jun 19, 2024

Official PyTorch implementation for paper: Diffusion-GAN: Training GANs with Diffusion

Python 677 73 Updated Mar 27, 2023

Generation of protein sequences and evolutionary alignments via discrete diffusion models

Python 650 102 Updated May 29, 2025

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361

Python 603 130 Updated Oct 30, 2025

AI molecular design tool for de novo design, scaffold hopping, R-group replacement, linker design and molecule optimization.

Python 601 174 Updated Nov 6, 2025

AI-powered ab initio biomolecular dynamics simulation

Python 550 77 Updated Feb 18, 2025

Code for 10.1021/acscentsci.7b00572, now running on Keras 2.0 and Tensorflow

Python 538 188 Updated Mar 24, 2023

[ICCV 2025] Diffuman4D: 4D Consistent Human View Synthesis from Sparse-View Videos with Spatio-Temporal Diffusion Models

Python 526 24 Updated Oct 27, 2025

Implementation of E(n)-Equivariant Graph Neural Networks, in Pytorch

Python 505 83 Updated Dec 6, 2024

Collected scripts for Pymol

Python 497 266 Updated Aug 9, 2025

Benchmarks for generative chemistry

Python 484 96 Updated Feb 11, 2024

Python implementation of the conformal prediction framework.

Python 473 96 Updated Mar 20, 2021

The Pytorch implementation for "Semantic Graph Convolutional Networks for 3D Human Pose Regression" (CVPR 2019).

Python 473 81 Updated Jun 16, 2021
Python 473 105 Updated Feb 6, 2025

A Euclidean diffusion model for structure-based drug design.

Python 467 114 Updated Jun 25, 2025

Open Drug Discovery Toolkit

Python 453 123 Updated Dec 13, 2022

Interaction Fingerprints for protein-ligand complexes and more

Python 449 86 Updated Oct 30, 2025

Training neural network potentials

Python 447 94 Updated Sep 12, 2025