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55 stars written in Python
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Multitrack exporter for OP-Z

Python 128 13 Updated Jul 25, 2025

Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval

Python 120 9 Updated Aug 30, 2024

It's a package for evaluation of predicted poses, right?

Python 71 9 Updated Nov 4, 2025

Deep learning for cryo-EM maps post-processing

Python 55 9 Updated Jun 26, 2025

STAR file I/O in Python

Python 51 20 Updated Sep 8, 2025

New program to follow Relion projects in a browser!

Python 46 2 Updated May 14, 2025

Python library that enables scripting access to CryoSPARC, a cryo-EM software package.

Python 41 9 Updated Nov 7, 2025

BoxNet implemented in TensorFlow and all current training data

Python 32 6 Updated Apr 25, 2019

Tools for exploring reciprocal space

Python 32 14 Updated Nov 9, 2025

Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset

Python 30 8 Updated Sep 18, 2025

Structure refinement and validation for crystallography and single particle analysis

Python 30 5 Updated Nov 4, 2025

Python tools for the lazy DM

Python 27 2 Updated Dec 18, 2024

The Ableton Device File Processor is a Python-based system for creating and modifying Ableton Live drum racks (.adg) and sampler instruments. It provides several specialized scripts for different u…

Python 25 1 Updated Jul 3, 2025

IMPSy - the Interactive Musical Prediction SYstem

Python 25 8 Updated Nov 7, 2025

Create Drum Rack presets in Ableton Live 11

Python 24 5 Updated Jul 3, 2022

Cryo-EM micrograph segmentation through deep learning

Python 22 Updated Oct 10, 2025

Rigid body fitting of atomic strucures in cryo-electron microscopy density maps

Python 22 9 Updated Oct 28, 2025

Tools for interfacing between cryoSPARC and Relion

Python 19 2 Updated Feb 8, 2024

Manipulate and mine Relion .star files

Python 19 4 Updated Nov 25, 2024

Ice gradient estimation for cryoEM

Python 10 6 Updated Oct 11, 2024

Read electron event representation (EER) files in Python

Python 8 1 Updated Nov 8, 2025

A selection of generative art scripts written in Python

Python 5 Updated Jan 31, 2022

This repository contains Scitify, a custom tool that automatically retrieves publication updates from bioRxiv, arXiv, and/or PubMed based on specified keywords.

Python 4 Updated Jan 9, 2025

a command-line companion for rediscovering your own sound

Python 3 1 Updated Oct 15, 2025

Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset

Python 1 Updated Nov 14, 2023