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Add singularity.autoMounts = true to config or put autoMounts = true in scope #48

@FedericoComoglio

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@FedericoComoglio

Hi,

after my sarek runs aborted due to what looked like an issue with singularity autoMounts, I figured this line in nextflow.config

autoMounts = true

should either be singularity.autoMounts = true or put in a scope.

Hope this helps.
Federico

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