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Starred repositories

50 stars written in C
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C library for high-throughput sequencing data formats

C 887 460 Updated Oct 23, 2025

A fuzzy search tool for the command-line

C 832 42 Updated May 17, 2023

Onigmo is a regular expressions library forked from Oniguruma.

C 660 100 Updated Jun 15, 2024

Dynamic Image Transformation Module For nginx.

C 471 80 Updated Jul 16, 2024

Shifter - Linux Containers for HPC

C 362 66 Updated Oct 25, 2025

An optimized C library for math, parallel processing and data movement

C 315 112 Updated Oct 5, 2020

AGREP - approximate GREP for fast fuzzy string searching. Files are searched for a string or regular expression, with approximate matching capabilities and user-definable records. Developed 1989-19…

C 312 50 Updated Jan 28, 2025

🍢 Lightweight process containers for Linux

C 201 31 Updated May 28, 2022

FASTA/FASTQ pre-processing programs

C 191 64 Updated Mar 4, 2022

Independent JPEG Group's JPEG software

C 188 159 Updated Sep 25, 2020

[IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long reads

C 125 9 Updated Sep 10, 2018

mod_websocket for lighty ( http://www.lighttpd.net/ )

C 102 28 Updated Sep 7, 2018

OCR in Javascript via Emscripten

C 99 23 Updated Dec 31, 2013

"opensource COBOL" is open-source COBOL compiler, an extension of the Japan-specific features. "opensource COBOL" translates COBOL program to C code and compiles it using GCC or CL.

C 82 33 Updated Aug 1, 2025

Linux port of https://github.com/mattn/gopher

C 60 3 Updated Jun 16, 2024

clone of swftools git repository

C 48 20 Updated Sep 6, 2011

The SMALLLIGHT is a module of Apache2 which provides a dynamic image transformation.

C 28 9 Updated Dec 2, 2019

fork of tesseract for emscripten

C 21 12 Updated Jul 21, 2015

[Deprecated]The Markdown parser for Qiita, based on Redcarpet.

C 10 2 Updated Sep 1, 2025