Repositories list

• synapse-avivator

  Public
  View Synapse-hosted OME-TIFF images in Avivator with transparent presigned URL refresh

  Python

  •0•0•0•0•Updated Apr 2, 2026Apr 2, 2026

• Synapse-Stack-Builder

  Public
  Project for building a complete Synapse Stack

  Java

  •

  Apache License 2.0

  •25•6•0•10•Updated Apr 2, 2026Apr 2, 2026

• genie-data-model-planning

  Public
  R

  •0•0•0•0•Updated Apr 1, 2026Apr 1, 2026

• BridgeServer2

  Public
  Bridge Server 2.0 running on Spring Boot

  Java

  •

  Other

  •25•5•0•0•Updated Apr 1, 2026Apr 1, 2026

• synapsePythonClient

  Public
  Programmatic interface to Synapse services for Python

  pythonsynapse

  pythonsynapse

  Python

  •

  Apache License 2.0

  •74•78•3•12•Updated Apr 1, 2026Apr 1, 2026

• sageassembly.org

  Public
  Sage Assembly 2026 website

  HTML

  •

  Apache License 2.0

  •0•0•0•0•Updated Apr 1, 2026Apr 1, 2026

• SynapseWebClient

  Public
  The web client of the Synapse REST service core

  JavaScript

  •

  Apache License 2.0

  •39•24•1•8•Updated Apr 1, 2026Apr 1, 2026

• synapse-web-monorepo

  Public
  Monorepo for Synapse Web projects

  TypeScript

  •

  Apache License 2.0

  •34•10•5•41•Updated Apr 1, 2026Apr 1, 2026

• snowflake

  Public
  Snowflake Administration, Transformations, and Analytics

  snowflake

  snowflake

  Python

  •

  Apache License 2.0

  •4•6•0•6•Updated Apr 1, 2026Apr 1, 2026

• GENIE-Sponsored-Projects

  Public
  This repository contains processing code for GENIE sponsored projects used for creating cBioPortal files

  genie

  genie

  Python

  •

  MIT License

  •1•5•5•1•Updated Apr 1, 2026Apr 1, 2026

• Synapse-Repository-Services

  Public
  The Synapse Repository Services project is the home of the JSON REST web services for Synapse.

  Java

  •

  Apache License 2.0

  •56•43•0•15•Updated Apr 1, 2026Apr 1, 2026

• portal-agent-contexts

  Public
  A repository for portal agent contexts: prompts, examples queries, skills, etc..

  GNU General Public License v3.0

  •1•0•0•0•Updated Apr 1, 2026Apr 1, 2026

• sage-monorepo

  Public
  ✨ Monorepo for OpenChallenges, BioArena, Agora, and other open-source apps developed to advance open science and collaborative research.

  angularopenapimonorepo+ 10

  angularopenapimonorepofull-stackfairdeveloper-experiencenxagoradev-exspecification-first+ 3

  TypeScript

  •

  Apache License 2.0

  •16•27•11•6•Updated Apr 1, 2026Apr 1, 2026

• bucket-antivirus-function

  Public
  Serverless antivirus for cloud storage.

  Python

  •

  Apache License 2.0

  •379•1•0•0•Updated Mar 31, 2026Mar 31, 2026

• synapse-cloudwatch-dashboard

  Public
  CDK-based Cloudwatch dashboard to review stack performance

  Python

  •2•0•0•2•Updated Mar 31, 2026Mar 31, 2026

• service-catalog-library

  Public
  Library of service catalog templates

  scipool

  scipool

  Apache License 2.0

  •9•0•0•1•Updated Mar 31, 2026Mar 31, 2026

• sagebrain-app-poc

  Public
  POC app for sage-brain

  Python

  •0•1•0•0•Updated Mar 30, 2026Mar 30, 2026

• synapser

  Public
  An R package providing programmatic access to Synapse

  rsynapse

  rsynapse

  R

  •

  Apache License 2.0

  •22•37•3•3•Updated Mar 30, 2026Mar 30, 2026

• Synapse-Stack-Review-Agenda

  Public
  This is the agenda for the weekly Synapse stack release meeting

  HTML

  •6•0•0•1•Updated Mar 29, 2026Mar 29, 2026

• synapse-docker-registry

  Public
  ECS deployment for the Synapse Docker registry

  Python

  •2•0•0•0•Updated Mar 29, 2026Mar 29, 2026

• agora-data-tools

  Public
  A place for Agora's ETL and Data Testing

  Python

  •

  Apache License 2.0

  •4•2•0•6•Updated Mar 26, 2026Mar 26, 2026

• model-ad-data-manager

  Public
  Shell

  •

  Apache License 2.0

  •3•0•0•0•Updated Mar 26, 2026Mar 26, 2026

• react-datasheet-grid

  Public
  An Airtable-like / Excel-like component to create beautiful spreadsheets.

  TypeScript

  •

  MIT License

  •208•0•0•0•Updated Mar 26, 2026Mar 26, 2026

• synapse-mcp

  Public
  Deployed into AWS ECS via https://github.com/Sage-Bionetworks-IT/synapse-mcp-infra

  Python

  •

  MIT License

  •0•2•2•2•Updated Mar 26, 2026Mar 26, 2026

• synapseformation

  Public
  Client for using Synapse Formation templates.

  Python

  •

  Apache License 2.0

  •5•5•5•1•Updated Mar 26, 2026Mar 26, 2026

• sage-cancer-landing-page

  Public
  SCSS

  •1•0•0•1•Updated Mar 25, 2026Mar 25, 2026

• agent-skills

  Public
  This repository contains agent skills that are leveraged across Sage Bionetworks

  Apache License 2.0

  •3•2•1•3•Updated Mar 25, 2026Mar 25, 2026

• genie-bpc-pipeline

  Public
  GENIE BPC pipeline scripts

  genie

  genie

  R

  •

  MIT License

  •1•4•0•4•Updated Mar 24, 2026Mar 24, 2026

• data_curator

  Public
  Data and metadata ingress app

  R

  •

  Apache License 2.0

  •20•10•49•0•Updated Mar 23, 2026Mar 23, 2026

• synapse-ops-core

  Public
  Synapse Ops scripts workflows and CDK+workflow for creating self-hosted runners

  Shell

  •

  Apache License 2.0

  •5•0•0•3•Updated Mar 21, 2026Mar 21, 2026