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    12 repositories

    • biojava

      Public
      :book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
      javabioinformaticsgenomicspdbparser-libraryprotein-data-bankprotein-structureprotein-sequencessequence-alignmentprotein-modification
      Java
      •
      GNU Lesser General Public License v2.1
      •395•624•67•2•Updated Dec 19, 2025Dec 19, 2025

    • biojava-spark

      Public
      :collision: Algorithms that are built around BioJava and run on Apache Spark
      Java
      •
      GNU Lesser General Public License v2.1
      •3•8•0•1•Updated Dec 19, 2025Dec 19, 2025

    • biojava-http

      Public
      HTML/JS based user interfaces for BioJava
      Java
      •6•4•0•2•Updated Dec 19, 2025Dec 19, 2025

    • biojava-legacy

      Public
      Legacy BioJava 1 Code
      Java
      •16•5•4•1•Updated Nov 7, 2025Nov 7, 2025

    • biojava.github.io

      Public
      The code for the new BioJava homepage.
      SCSS
      •
      Other
      •16•4•6•7•Updated Jan 9, 2025Jan 9, 2025

    • biojava-tutorial

      Public
      :book::books:An introductory tutorial for BioJava
      javabioinformaticstutorialgenomicsprotein-structurebiojava3d-structureprotein-disorder
      Python
      •
      Other
      •42•122•4•0•Updated Feb 23, 2024Feb 23, 2024

    • rcsb-sequenceviewer

      Public archive
      PDB Amino Acid Sequence Viewer
      Java
      •4•6•2•1•Updated Feb 8, 2024Feb 8, 2024

    • rcsb-viewers

      Public archive
      Biojava based RCSB Viewers
      Java
      •10•3•2•4•Updated Feb 8, 2024Feb 8, 2024

    • biojava-adam

      Public
      Biojava and ADAM integration.
      Java
      •
      GNU Lesser General Public License v3.0
      •2•2•3•1•Updated Apr 21, 2023Apr 21, 2023

    • logo

      Public
      A repository to host the competition for a new BioJava logo
      Other
      •5•5•0•0•Updated Mar 12, 2018Mar 12, 2018

    • biojava-cookbook

      Public
      Collection of quick 'recipes' for common BioJava tasks
      0•1•2•0•Updated Jan 11, 2017Jan 11, 2017

    • maven-repo

      Public
      A BioJava specific maven repository, mostly for legacy releases, since all new releases are on Maven Central
      GNU Lesser General Public License v2.1
      •0•1•0•0•Updated Apr 21, 2016Apr 21, 2016