Meyer Laboratory

All

29 repositories

plinkQC
Public
R package for quality control of plink genetic datasets
R
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Other
•26•62•11•0•Updated Nov 29, 2025Nov 29, 2025
copepodTCR
Public
COmbinatorial PEptide POoling for TCR specificity
protocol immunology t-cells
Python
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Other
•1•1•0•0•Updated Nov 19, 2025Nov 19, 2025
rnaseq-tutorial
Public
Python
•6•4•0•0•Updated Oct 9, 2025Oct 9, 2025
R-data-visualisation-course
Public
HTML
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MIT License
•11•11•0•0•Updated Sep 4, 2025Sep 4, 2025
peptide_pooling_simulation
Public
Peptide pooling experiment simulation
Python
•0•0•0•0•Updated Aug 15, 2025Aug 15, 2025
copepodTCR_paper
Public
Supplement repository to «Identification of Antigen-Specific T Cell Receptors with Combinatorial Peptide Pooling»
protocol immunology t-cells
Jupyter Notebook
•0•0•0•0•Updated Aug 15, 2025Aug 15, 2025
codepub
Public
Algorithms for sequence construction
bioinformatics algorithm sequence-analysis
Python
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Other
•0•0•0•0•Updated Aug 13, 2025Aug 13, 2025
codepub_tests
Public
Supplement repository to «Unbiased and Error-Detecting Combinatorial Pooling Experiments with Balanced Constant-Weight Gray Codes for Consecutive Positives Detection»
bioinformatics algorithm sequence-analysis
Jupyter Notebook
•0•0•0•0•Updated Aug 13, 2025Aug 13, 2025
PhenotypeSimulator
Public
HTML
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Other
•5•30•2•0•Updated Jul 10, 2025Jul 10, 2025
BATMAN
Public
Bayesian inference of Activation of TCR by Mutant Antigens
immunology bayesian-inference immunoinformatics epitope-prediction-methods tcr-epitope epitope-immunogenicity-prediction epitope-datasets peptide-bioinformatics t-cell-response
Jupyter Notebook
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Other
•0•8•0•0•Updated Jun 26, 2025Jun 26, 2025
BATMAN-paper
Public
Bayesian inference of Activation of TCR by Mutant Antigens
immunology bayesian-inference immunoinformatics epitope-prediction-methods tcr-epitope epitope-immunogenicity-prediction epitope-datasets peptide-bioinformatics t-cell-response
Python
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Other
•0•5•2•0•Updated Jun 26, 2025Jun 26, 2025
xspeciestcells
Public
Transcriptomic profile of human conventional & innate T cells in the thymus and peripheral blood
HTML
•1•0•0•0•Updated Jun 4, 2025Jun 4, 2025
meyer-lab-cshl.github.io
Public
JavaScript
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MIT License
•2•3•0•0•Updated Jan 22, 2025Jan 22, 2025
transcriptomic-diversity-human-mTECs
Public
Jupyter Notebook
•0•1•0•0•Updated Dec 6, 2024Dec 6, 2024
plinkQCAncestryData
Public
0•0•0•0•Updated Sep 18, 2024Sep 18, 2024
snakemake-uge
Public
Python
•3•8•1•1•Updated Aug 7, 2024Aug 7, 2024
batman_shiny
Public
R
•0•0•0•0•Updated Dec 11, 2023Dec 11, 2023
xspeciestcells-shiny
Public
R
•0•0•0•0•Updated Dec 5, 2023Dec 5, 2023
combinatorial_pooling
Public
Python
•
GNU General Public License v2.0
•0•0•0•0•Updated Nov 16, 2023Nov 16, 2023
in-silico-thymus
Public
Jupyter Notebook
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Other
•0•0•0•21•Updated Jun 3, 2023Jun 3, 2023
transcriptomic-diversity-human-mTECs-shiny
Public
R
•0•0•0•0•Updated Feb 13, 2023Feb 13, 2023
limix_qtl
Public
Python
•
Apache License 2.0
•15•0•0•0•Updated Jan 29, 2023Jan 29, 2023
dpi1
Public
Decomposition-based peak identification, which find peaks across a large number of TSS (transcription starting site) profiles
R
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GNU General Public License v2.0
•2•0•0•0•Updated May 3, 2021May 3, 2021
drStable
Public
R
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Other
•0•0•0•0•Updated Jan 27, 2021Jan 27, 2021
wonder-of-unittests
Public
The delights of unittests.
Python
•0•0•0•0•Updated Dec 7, 2020Dec 7, 2020
practical-statistics
Public
HTML
•0•1•0•0•Updated Sep 3, 2020Sep 3, 2020
utility-functions
Public
0•0•0•0•Updated Aug 12, 2020Aug 12, 2020
Genetic-association-studies
Public
R
•0•6•0•0•Updated May 22, 2020May 22, 2020
limmbo
Public
Python
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Apache License 2.0
•0•12•2•0•Updated Aug 8, 2019Aug 8, 2019