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81 stars written in Python
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This repository is an unoffical PyTorch implementation of Medical segmentation in 2D and 3D.

Python 926 200 Updated Feb 29, 2024
Python 854 88 Updated Aug 5, 2022

Official Pytorch Code for "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" - MICCAI 2021

Python 845 177 Updated Feb 23, 2023

code and trained models for "Attentional Feature Fusion"

Python 803 102 Updated Jul 23, 2021

BCDU-Net : Medical Image Segmentation

Python 777 273 Updated Jan 30, 2023

Mamba-UNet Zoo

Python 727 63 Updated Sep 13, 2024

Official code for "Boundary loss for highly unbalanced segmentation", runner-up for best paper award at MIDL 2019. Extended version in MedIA, volume 67, January 2021.

Python 704 98 Updated Mar 19, 2024

[ICCV 2023] CLIP-Driven Universal Model; Rank first in MSD Competition.

Python 656 80 Updated Oct 24, 2025

Morphological snakes for image segmentation and tracking

Python 640 180 Updated Jun 8, 2023

TMI 2018. H-DenseUNet: Hybrid Densely Connected UNet for Liver and Tumor Segmentation from CT Volumes

Python 568 163 Updated Dec 8, 2022

UniverSeg: Universal Medical Image Segmentation

Python 567 56 Updated Jul 15, 2023

Official Pytorch Code base for "UNeXt: MLP-based Rapid Medical Image Segmentation Network", MICCAI 2022

Python 547 82 Updated Sep 9, 2023

Wavelet Convolutions for Large Receptive Fields. ECCV 2024.

Python 518 16 Updated Jun 11, 2025

2019-nCoV 新冠状病毒 2019-12-01至今国家、省、市三级每日统计数据(支持接口读取)

Python 507 189 Updated Dec 8, 2020

[IEEE TMI-2024] UNETR++: Delving into Efficient and Accurate 3D Medical Image Segmentation

Python 489 48 Updated Oct 18, 2025

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

Python 450 49 Updated Nov 2, 2024

Official repository of FLatten Transformer (ICCV2023)

Python 443 24 Updated Nov 4, 2024

This repo provides the official code for : 1) TransBTS: Multimodal Brain Tumor Segmentation Using Transformer (https://arxiv.org/abs/2103.04430) , accepted by MICCAI2021. 2) TransBTSV2: Towards Bet…

Python 431 92 Updated Mar 11, 2024

Implementation of our AAAI'22 work: 'UCTransNet: Rethinking the Skip Connections in U-Net from a Channel-wise Perspective with Transformer'.

Python 424 52 Updated May 19, 2024

Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI

Python 390 78 Updated Jul 6, 2023

[ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)

Python 378 13 Updated Sep 9, 2025

[ECCV 2022] Source code of "EdgeFormer: Improving Light-weight ConvNets by Learning from Vision Transformers"

Python 355 53 Updated Dec 14, 2022

Official implementation of the CVPR 2024 paper ViT-CoMer: Vision Transformer with Convolutional Multi-scale Feature Interaction for Dense Predictions.

Python 330 22 Updated Jan 21, 2025

InceptionNeXt: When Inception Meets ConvNeXt (CVPR 2024)

Python 326 24 Updated Dec 2, 2024

[MICCAI2021] CoTr: Efficiently Bridging CNN and Transformer for 3D Medical Image Segmentation

Python 320 47 Updated Sep 17, 2024

Official repository of CVPR 2024 paper "EMCAD: Efficient Multi-scale Convolutional Attention Decoding for Medical Image Segmentation"

Python 291 17 Updated Jul 21, 2025

This is the official repository for the paper "3D TransUNet: Advancing Medical Image Segmentation through Vision Transformers"

Python 286 38 Updated Jul 26, 2024
Python 279 37 Updated Jun 1, 2023

MedSeg: Medical Image Segmentation GUI Toolbox 可视化医学图像分割工具箱

Python 270 21 Updated Sep 10, 2024

[MICCAI2022] This is an official PyTorch implementation for A Robust Volumetric Transformer for Accurate 3D Tumor Segmentation

Python 269 36 Updated Sep 11, 2023