Hi there,
I am trying out similarity_graph to compute the connectivities graph. I am using it to compute clustering(similar to scanpy workflow). However, how do I input this connectivities information into the umap, so I can skip the recomputation? Or is there a way to retreive the similarity_graph when doing the umap?
Hi there,
I am trying out similarity_graph to compute the connectivities graph. I am using it to compute clustering(similar to scanpy workflow). However, how do I input this connectivities information into the umap, so I can skip the recomputation? Or is there a way to retreive the similarity_graph when doing the umap?