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Starred repositories

91 stars written in R
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Complex, interactive heatmaps in R

R 270 36 Updated Aug 13, 2024

This repository contains ROC and precision-recall curve animations

R 260 40 Updated Nov 14, 2023

Gene set variation analysis

R 237 42 Updated Apr 8, 2026

An Import Mechanism For R

R 229 15 Updated Oct 20, 2025

Regression Modeling Strategies

R 194 53 Updated Apr 5, 2026

Use LaTeX in R graphics.

R 193 11 Updated Aug 16, 2024

Venn Diagram by ggplot2, with really easy-to-use API.

R 183 27 Updated Oct 13, 2025

Tools for visualizing uncertainty with ggplot2

R 157 9 Updated Mar 6, 2025

R Package for Analyzing John Snow's 1854 Cholera Map

R 140 15 Updated Apr 3, 2026

Simplify functional enrichment results

R 124 17 Updated Jan 30, 2026

Improved text rendering support for grid graphics in R

R 97 19 Updated Feb 18, 2026

R package to analyze large-scale pharmacogenomic datasets.

R 71 26 Updated Mar 25, 2026

COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.

R 67 16 Updated Mar 17, 2026

Source code for the R package, "dbparser" (i.e. DrugBank Parser)

R 66 19 Updated Feb 21, 2026

R package for quality control of plink genetic datasets

R 65 26 Updated Mar 27, 2026

CAusal Reasoning for Network Identification with integer VALue programming in R

R 62 28 Updated Dec 6, 2023

String and byte representations for all kinds of R objects

R 54 32 Updated Jul 28, 2025

Advanced forest plots in R using grid graphics

R 50 17 Updated Mar 3, 2026

Jupyter display machinery for R

R 47 14 Updated Mar 6, 2023

Tracking the progress of mc*apply with progress bar.

R 45 4 Updated Apr 28, 2022

Fits a Principal Curve in Arbitrary Dimension ⤵

R 44 6 Updated Jan 16, 2025

An R package for creating a panel of diagnostic plots for residuals from a model.

R 37 5 Updated Mar 31, 2025

Statistical power studies for multi-omics experiments.

R 32 10 Updated Jan 18, 2025

R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis

R 32 5 Updated Mar 4, 2026
R 29 8 Updated Mar 16, 2023

Stability Selection with Error Control

R 26 10 Updated Jan 30, 2026

DESeq2 or edgeR

R 22 7 Updated Sep 28, 2016

Sparse Canonical Correlation Analysis (sCCA)

R 20 6 Updated Dec 3, 2021

plsRglm R package

R 19 4 Updated Mar 28, 2026