Stars
scikit-learn cross validators for iterative stratification of multilabel data
Python library to handle Gene Ontology (GO) terms
Making Protein Design accessible to all via Google Colab!
[Image 2 Text Para] Transform Image into Unique Paragraph with ChatGPT, BLIP2, OFA, GRIT, Segment Anything, ControlNet.
Robust representation of semantically constrained graphs, in particular for molecules in chemistry
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
A generative model for programmable protein design
Code for Noisy Student Training. https://arxiv.org/abs/1911.04252
A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)
The Tensorflow, Keras implementation of U-net, V-net, U-net++, UNET 3+, Attention U-net, R2U-net, ResUnet-a, U^2-Net, TransUNET, and Swin-UNET with optional ImageNet-trained backbones.
BiomedGPT: A Generalist Vision-Language Foundation Model for Diverse Biomedical Tasks
Generation of protein sequences and evolutionary alignments via discrete diffusion models
A Python vector database you just need - no more, no less.
Two simple and effective designs of vision transformer, which is on par with the Swin transformer
[ICLR2025 Spotlight🔥] Official Implementation of TokenFormer: Rethinking Transformer Scaling with Tokenized Model Parameters
Code snippets created for the PyTorch discussion board
Official repository for the paper "Grokfast: Accelerated Grokking by Amplifying Slow Gradients"
DFloat11: Lossless LLM Compression for Efficient GPU Inference
Saprot: Protein Language Model with Structural Alphabet (AA+3Di)
AlphaFold Meets Flow Matching for Generating Protein Ensembles
[JBHI] Code for our paper "Multi-scale Guided Attention for Medical Image Segmentation"
Tools to scrape publications & their metadata from pubmed, arxiv, medrxiv, biorxiv and chemrxiv.
An open-source platform for developing protein models beyond AlphaFold.
Repository for StripedHyena, a state-of-the-art beyond Transformer architecture
Python library & examples for Masked Language Model Scoring (ACL 2020)