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Commits on Sep 17, 2021

• Merge pull request #108 from JaeseungYeom/simple_example

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• add simple exmple in SBML and remove the GraphML version

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Commits on Aug 24, 2021

• Merge pull request #105 from JaeseungYeom/fixdes

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• fix des.cpp to replicate the obsolete SSA_Config struct with SSA_Params

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Commits on Jul 7, 2021

• Merge pull request #104 from Kgeorgouli/update_python_script

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• Merge branch 'devel' into update_python_script

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Commits on Jun 30, 2021

• Update python script for generating the M. genitalium networks

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Commits on Jun 29, 2021

• Merge pull request #102 from Kgeorgouli/update_python_script

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Commits on Jun 23, 2021

• Update python script for generating the M. genitalium networks

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Commits on Apr 21, 2021

• Update README.md

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• Update README.md

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Commits on Mar 19, 2021

• Merge pull request #100 from JaeseungYeom/jit_time

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• make number of compiling threads as an option for JIT module

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• measure the time to generate code and compile code

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• Merge pull request #99 from JaeseungYeom/exchg_type

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• Fix the type for exchanging vertex id between network partitions using OpenMP

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Commits on Mar 18, 2021

• Merge pull request #98 from JaeseungYeom/icc_workaround

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• Workaround for intel not being able to compile do-while loop

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• Merge pull request #97 from JaeseungYeom/short_path

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• use a relative path in the generated makefile

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• Merge pull request #96 from JaeseungYeom/makefile_cxx

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• Merge pull request #95 from LLNL/revert-94-makefile_cxx

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• Revert "Define CXX variable in makefile and replace hardcoded paths to the compiler"

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• Use variables to subsitute commonly used options in generated makefile

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• Merge pull request #94 from JaeseungYeom/makefile_cxx

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• Define CXX variable in makefile

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• Merge pull request #93 from JaeseungYeom/fix_dep_analysis_with_omp

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• remote duplicate lines

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Commits on Mar 15, 2021

• Merge pull request #92 from Kgeorgouli/fix_bug_in_script_for_mg_net

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• Merge pull request #91 from JaeseungYeom/fix_dep_analysis_with_omp

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• Merge branch 'devel' into fix_dep_analysis_with_omp

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• Merge pull request #89 from JaeseungYeom/tmpdir

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• Merge branch 'devel' into tmpdir

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• Merge branch 'devel' into fix_dep_analysis_with_omp

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• Merge pull request #88 from JaeseungYeom/isolate

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