LabNet is a server to control hardware connected to RaspberryPi over Ethernet in behavioral experiment with animals

QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.

Functions used for wrangling education research data

A set of classes for using DICOM in VTK.

Wrap R vectors in markdown syntax

SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers

DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medi…

Various documents, talk slides, posters, videos, brochures on

A Python client for the OK autograding system

Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.

String distance functions for R

PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sheets -- paper @JOSS https://doi.org/10.21105/joss.06067

This repository contains all code for the BLMM toolbox.

Introduction to R for Social Scientists

Multi-format in vivo MR spectroscopy conversion to NIFTI

Scripts to prepare MP2RAGE for Freesurfer

ANTs-based commandline utilities for (1) consistent, super-fast defacing of anatomical MRI images (2) dielectric pad masking

The QDECR package for vertex-wise analyses in R

Optimizing the Accuracy of Cortical Volumetric Analysis in Traumatic Brain Injury

Quarto extension for calculating accurate word counts

a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

automated prescription of MRS voxels

All-in-one toolbox for processing of magnetic resonance spectroscopy data.