The Book of OHDSI repository

Automation code and documentation for standing up the OHDSI toolstack in an AWS environment

Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.

Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.

[under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack

Definition and DDLs for the OMOP Common Data Model (CDM)

An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

Python package for machine learning for healthcare using a OMOP common data model

Main OMOPonFHIR Settings

eds-scikit is a Python library providing tools to process and analyse OMOP data

Dynamic visualization of Electronic Health Record data in the OMOP framework

PCORnet Ontology to OMOP - beta!

Research with the National Clinical Cohort Collaborative (N3C)

An R package for assessing the trends in incidence and outcome of the user-defined condition based on OMOP-CDM

An R package that facilitates access to a variety of OMOP CDM sample data sets.

An updated version of OSIM for CDM v5

Helper functions for Roux AoU Frailty Project

Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.

Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.