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tajima

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CATE

theLongLab / CATE

A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests and viral simulations at scale. Related manuscripts: https://doi.org/10.1111/2041-210X.14168 and https://doi.org/10.1038/s41467-025-60988-8

genome genetics anaconda cuda conda vcf epidemiology hiv viral-genomics 1000genomes evolutionary-biology neutrality ehh mk-test epidemic-simulations sars-cov-2 extended-haplotype-homozygosity tajima

Updated Aug 20, 2025
Cuda

benben-miao / PopGeneticsVis

PopGeneticsVis: a toolkit for whole-genome resequencing and bisulfite sequencing downstream visualization in population genetics.

visualization terminal methylation population-genetics wgs wgbs dmr fst rlang tajima

Updated Oct 7, 2025
R

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