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# Copyright (c) TAPIP3D team(https://tapip3d.github.io/)
import time
import re
import os
from einops import repeat, rearrange
from omegaconf import DictConfig, OmegaConf
import logging
from multiprocessing import Process
from tqdm import tqdm
import hydra
import numpy as np
import torch
import torch.multiprocessing
import pickle
import wandb
torch.multiprocessing.set_sharing_strategy('file_system')
from training.datatypes import Prediction, TrainData
from utils.inference_utils import _inference_with_grid
from datasets.datatypes import SliceData
import models
from datasets.base_dataset import BaseDataset
from utils.common_utils import (
batch_project, count_parameters, setup_logger
)
from training.engine import BaseTrainTester, get_rank
from third_party.cotracker.visualizer import Visualizer
from training.criterion import TrajectoryCriterion
import utils.rerun_visualizer as visualizer
import evaluation.metrics as metrics
import torch.profiler as profiler
logger = logging.getLogger(__name__)
class TrainTester(BaseTrainTester):
"""Train/test a trajectory optimization algorithm."""
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
def get_criterion(self):
return TrajectoryCriterion(train_iters=self.cfg.train.train_iters, eval_iters=self.cfg.train.eval_iters, ** self.cfg.criterion)
def get_datasets(self):
"""Initialize datasets."""
# Initialize datasets with arguments
if not self.cfg.train.get('eval_only', False):
train_dataset_cfg = self.cfg.train_dataset.copy()
if self.cfg.train.get('additional_transform'):
train_dataset_cfg.transform = self.cfg.train_dataset.transform + self.cfg.train.additional_transform
train_dataset = BaseDataset.from_config(
train_dataset_cfg,
)
else:
train_dataset = None
test_datasets = {}
for key, cfg in self.cfg.test_datasets.items():
cfg = cfg.copy()
if self.cfg.get('eval', {}).get('additional_transforms', []):
if 'transform' in cfg:
cfg.transform = cfg.transform + self.cfg.eval.get('additional_transforms', [])
test_datasets[key] = BaseDataset.from_config(cfg)
else:
test_datasets[key] = BaseDataset.from_config(cfg, transform=self.cfg.eval.get('additional_transforms', []))
else:
test_datasets[key] = BaseDataset.from_config(cfg)
return train_dataset, test_datasets
def get_model(self):
"""Initialize the model."""
# Initialize model with arguments
_model = models.from_config(
self.cfg.model,
image_size=tuple(self.cfg.train_dataset.resolution),
)
logger.info(f"Model initialized with {count_parameters(_model):,} trainable parameters")
return _model
def train_one_step(self, model, criterion, step_id, sample):
"""Run a single training step."""
sample.skip_post_init = True
est_sample = sample.with_annot_mode('est')
assert est_sample.depth_roi is None, "depth_roi should be None for training"
# Forward pass
if self.cfg.train.streaming_backward:
pred = None
train_data_list = []
with self.accelerator.autocast():
feats = model.encode_rgbs(est_sample.rgbs)
feats_param = torch.nn.Parameter(feats.detach().clone(), requires_grad=True)
generator = model.streaming_forward(
rgb_obs=est_sample.rgbs,
depth_obs=est_sample.depths,
num_iters=self.cfg.train.train_iters,
query_point=est_sample.query_point,
intrinsics=est_sample.intrinsics,
extrinsics=est_sample.extrinsics,
image_feats=feats_param,
mode="training",
check_ref=False,
flags=est_sample.flags,
)
while True:
with self.accelerator.autocast():
output = next(generator, None)
if output is None:
break
assert not torch.is_autocast_enabled(), "AMP should not be enabled during loss computation"
if isinstance(output, TrainData):
loss, _ = criterion.compute_loss(sample=sample, train_data=output, bidirectional=model.bidirectional, is_train=True)
self.accelerator.backward(loss, retain_graph=True)
train_data_list.append(output.detach(clone=True)) # type: ignore
del output, loss, _
elif isinstance(output, Prediction):
assert pred is None, "Internal error"
pred = output
else:
raise ValueError(f"Unknown output type: {type(output)}")
feats_grad = feats_param.grad
assert not feats_grad.requires_grad, "feats_grad should not require grad"
del feats_param
self.accelerator.backward((feats_grad * feats).sum())
del feats_grad
assert pred is not None, "Internal error"
else:
pred, train_data_list = model(
rgb_obs=est_sample.rgbs,
depth_obs=est_sample.depths,
num_iters=self.cfg.train.train_iters,
query_point=est_sample.query_point,
intrinsics=est_sample.intrinsics,
extrinsics=est_sample.extrinsics,
flags=est_sample.flags,
mode="training",
)
# Loss for backward pass
loss_list, info_list = [], []
for train_data in train_data_list:
loss, info = criterion.compute_loss(sample=sample, train_data=train_data, bidirectional=self.accelerator.unwrap_model(model).bidirectional, is_train=True)
loss_list.append(loss)
info_list.append(info)
loss = torch.sum(torch.stack(loss_list), dim=0)
info = {k: torch.sum(torch.stack([info[k] for info in info_list]), dim=0) for k in info_list[0]}
self.output_stream.write(f"step: {step_id}, seq_name: {sample.seq_name}, loss: {loss.item():.4f}\n")
if self.cfg.train.streaming_backward:
assert not loss.requires_grad, "Internal error"
else:
assert loss.requires_grad, "Internal error"
if (step_id + 1) % 10 == 0:
log_str = f"[Step {step_id+1}] loss: {loss.item():.4f}"
for k, v in info.items():
log_str += f" | {k}: {v.item():.4f}"
if get_rank() == 0:
logger.info(log_str)
self.output_stream.flush()
if self._should_log() and (step_id + 1) % 10 == 0:
wandb.log(
{
"lr": self.optimizer.param_groups[0]['lr'],
"train-loss/total_loss": loss,
"step": step_id
},
)
return loss
@torch.no_grad()
def evaluate_dataset(self, model, criterion, loader, step_id, dataset_name):
"""Run evaluation on a dataset."""
self.accelerator.wait_for_everyone()
if self.accelerator.is_main_process and self.cfg.train.get("save_preds", False):
(self.output_dir / f"pred_{step_id}").mkdir(parents=True, exist_ok=True)
self.accelerator.wait_for_everyone()
eval_grid_size = self.cfg.train.get("eval_grid_size", 0)
values = {"seq_id": []}
device = next(model.parameters()).device
model.eval()
bidirectional_eval: bool = self.cfg.train.bidirectional_eval
is_model_bidirectional: bool = self.accelerator.unwrap_model(model).bidirectional
visited_indices = set()
rank = get_rank()
for i, sample in enumerate(tqdm(loader, position=1, desc=f"Evaluating {dataset_name}")):
start_time = time.time()
sample = sample.to(device)
sample_id = sample.sample_id.item()
# Handle redundant samples from DistributedSampler padding
if torch.distributed.is_initialized():
sample_ids = [None for _ in range(self.accelerator.num_processes)]
torch.distributed.all_gather_object(sample_ids, (rank, sample_id))
else:
sample_ids = [(rank, sample_id)]
should_skip = False
for r, idx in sample_ids:
if idx in visited_indices and r == rank:
should_skip = True
visited_indices.add(idx)
if should_skip:
logger.debug(f"Skipping sample {sample_id} because it has already been evaluated (likely a padded sample)")
continue
if (i + 1) % 10 == 0:
if rank == 0:
logger.info(f"Evaluating sample {sample_id} ({i+1}/{len(loader)}) on rank {rank}")
est_sample = sample.with_annot_mode('est')
preds, train_data = _inference_with_grid(
grid_size=eval_grid_size,
model=model,
video=est_sample.rgbs,
depths=est_sample.depths,
num_iters=self.cfg.train.eval_iters,
query_point=est_sample.query_point,
intrinsics=est_sample.intrinsics,
extrinsics=est_sample.extrinsics,
flags=est_sample.flags,
depth_roi=est_sample.depth_roi,
)
# Use forward prediction to compute loss
loss_list, info_list = [], []
for train_data_item in train_data:
loss, info = criterion.compute_loss(sample=sample, train_data=train_data_item, bidirectional=is_model_bidirectional, is_train=False)
loss_list.append(loss)
info_list.append(info)
if len(loss_list) > 0:
loss = torch.sum(torch.stack(loss_list), dim=0)
info = {k: torch.sum(torch.stack([info[k] for info in info_list]), dim=0) for k in info_list[0]}
else:
loss = torch.tensor(0., device=device)
info = {}
assert sample.seq_id.shape[0] == 1, "batch size must be 1 for evaluation"
values["seq_id"].append(sample.seq_id.squeeze(0))
for n, l in info.items():
key = f"{dataset_name}-losses/mean/{n}"
if key not in values:
values[key] = []
values[key].append(l)
# Before computing the metrics, we might need to perform backward tracking
if bidirectional_eval and not is_model_bidirectional:
B, T = sample.rgbs.shape[:2]
N = est_sample.query_point.shape[1]
preds_backward, _ = _inference_with_grid(
grid_size=eval_grid_size,
model=model,
video=est_sample.rgbs.flip(dims=(1,)),
depths=est_sample.depths.flip(dims=(1,)),
intrinsics=est_sample.intrinsics.flip(dims=(1,)),
extrinsics=est_sample.extrinsics.flip(dims=(1,)),
query_point=torch.cat([est_sample.rgbs.shape[1] - 1 - est_sample.query_point[..., :1], est_sample.query_point[..., 1:]], dim=-1),
num_iters=self.cfg.train.eval_iters,
flags=est_sample.flags,
depth_roi=est_sample.depth_roi,
)
preds.coords = torch.where(
repeat(torch.arange(T, device=sample.rgbs.device), 't -> b t n 3', b=B, n=N) < repeat(est_sample.query_point[..., 0], 'b n -> b t n 3', t=T, n=N),
preds_backward.coords.flip(dims=(1,)),
preds.coords
)
preds.visibs = torch.where(
repeat(torch.arange(T, device=sample.rgbs.device), 't -> b t n', b=B, n=N) < repeat(est_sample.query_point[..., 0], 'b n -> b t n', t=T, n=N),
preds_backward.visibs.flip(dims=(1,)),
preds.visibs
)
metrics_dict = metrics.compute_metrics(sample=sample, preds=preds, bidirectional=is_model_bidirectional or bidirectional_eval)
if self.cfg.train.get("save_preds", False):
metrics_dict_np = {k: v.cpu().numpy()[0] for k, v in metrics_dict.items()}
preds_np = {"coords": preds.coords.cpu().numpy()[0], "visibs": preds.visibs.cpu().numpy()[0]}
with open(self.output_dir / f"pred_{step_id}" / f"{sample_id}.pkl", "wb") as f:
pickle.dump(
{
"preds": preds_np,
"metrics": metrics_dict_np,
},
f
)
for n, m in metrics_dict.items():
key = f"{dataset_name}-metrics/mean/{n}"
if key not in values:
values[key] = []
values[key].append(m)
if i < self.cfg.train.visualize_nbatches:
if self._should_log():
# In this case we should log visualization to wandb
if step_id > -1:
samples_cpu = sample.to('cpu')
preds_cpu = preds.to('cpu')
if not is_model_bidirectional and not bidirectional_eval:
samples_cpu = samples_cpu.with_causal_mask()
generate_videos(
sample=samples_cpu.with_annot_mode('est'),
preds=preds_cpu,
output_dir=self.output_dir,
step_id=step_id,
batch_idx=i,
dataset_name=dataset_name,
)
if self.cfg.train.get("visualize_with_rerun", False):
# Log with rerun-sdk without interrupting training
try:
rerun_process = Process(target=generate_visualizations_with_rerun, kwargs={
'sample': samples_cpu.with_annot_mode('est'),
'preds': preds_cpu,
'output_dir': self.output_dir,
'step_id': step_id,
'dataset_name': dataset_name,
'batch_idx': i,
})
rerun_process.start()
rerun_process.join()
except Exception as e:
logger.error(f"Failed to log with rerun-sdk: {e}", exc_info=True)
end_time = time.time()
# logger.info(f"Time taken for batch {i}: {end_time - start_time:.2f} seconds")
# Synchronize between processes
self.accelerator.wait_for_everyone()
values = {k: torch.stack(v).cpu() for k, v in values.items()}
if torch.distributed.is_initialized():
values_list = [None for _ in range(self.accelerator.num_processes)]
torch.distributed.all_gather_object(values_list, values)
else:
values_list = [values]
values_all = {k: torch.cat([values_list[i][k] for i in range(len(values_list))]).numpy() for k in values.keys()}
values = {k: v.mean() for k, v in values_all.items()}
vis_related_keys = set([re.fullmatch(r'(.*)_visthr_.*', k).groups()[0] for k in values.keys() if re.fullmatch(r'(.*)_visthr_.*', k)])
for k in vis_related_keys:
values[k + "_best"] = np.max([v for k_, v in values.items() if k_.startswith(f'{k}_visthr')])
if self._should_log():
# Log to wandb
to_log = {
"step": step_id,
}
core_keys_mapping = {
"tapvid3d_average_pts_within_thresh": "3D APD",
"tapvid2d_average_pts_within_thresh": "2D APD",
}
core_keys = list (core_keys_mapping.keys())
core_keys.sort()
columns = ["seq_id"] + [core_keys_mapping[k] for k in core_keys]
table_content = []
values_all_suffix = {k.split("/")[-1]: k for k in values_all.keys()}
for i in range(len(values_all['seq_id'])):
table_content.append([int(values_all['seq_id'][i])] + ["%.4f" % float(values_all[values_all_suffix[k]][i]) for k in core_keys])
table_content.sort(key=lambda x: x[0])
to_log.update({f"{dataset_name}-eval-details/table": wandb.Table(columns=columns, data=table_content)})
for k in core_keys:
to_log.update({f"{dataset_name}-eval-details/{core_keys_mapping[k]}-hist": wandb.Histogram(values_all[values_all_suffix[k]])})
to_log.update(values)
wandb.log(to_log)
# Log to terminal
logger.info(f"Evaluation Results for {dataset_name} at Step {step_id}:")
max_key_len = max(len(k) for k in values.keys())
for key, value in sorted(values.items()):
logger.info(f" {key:<{max_key_len}}: {value:.4f}")
return - values[f"{dataset_name}-metrics/mean/tapvid3d_average_pts_within_thresh"]
def generate_videos(sample, preds, output_dir, step_id, batch_idx, dataset_name):
for i in range(len(sample.rgbs)):
save_dir = output_dir / f"visualization_{dataset_name}"
filename = f"video_{step_id}_{batch_idx}_{i}"
save_dir.mkdir(parents=True, exist_ok=True)
vis = Visualizer(save_dir=save_dir, pad_value=120, linewidth=3)
tracks_3d = preds.coords[i:i+1]
tracks_2d = batch_project(
tracks_3d,
repeat(sample.intrinsics[i:i+1], 'b t i j -> b t n i j', n=tracks_3d.shape[2]),
repeat(sample.extrinsics[i:i+1], 'b t i j -> b t n i j', n=tracks_3d.shape[2])
)
vis.visualize(
video=(sample.rgbs[i:i+1] * 255).to(torch.uint8),
tracks=tracks_2d,
visibility=(preds.visibs[i:i+1] > 0.),
valids=torch.ones_like(sample.valids[i:i+1]),
filename=filename
)
viz_key = f'{dataset_name}-viz/viz-{batch_idx}-{i}'
wandb.log(
{
"step": step_id,
viz_key: wandb.Video(str(f"{save_dir}/{filename}.mp4")),
}
)
def generate_visualizations_with_rerun(sample, preds, output_dir, step_id, batch_idx, dataset_name):
depths = sample.depths
for i in range(len(sample.rgbs)):
visualizer.setup_visualizer(app_name="Visualization", serve=False)
visualizer.log_video(
entity_name=f"video",
rgb=sample.rgbs[i],
intrinsics=sample.intrinsics[i],
extrinsics=sample.extrinsics[i],
depth=depths[i],
)
visualizer.log_trajectory(
entity_name=f"video",
track_name="pred",
intrinsics=sample.intrinsics[i],
extrinsics=sample.extrinsics[i],
trajs=preds.coords[i],
visibs=preds.visibs[i] > 0,
valids=torch.ones_like(sample.valids[i]), # no need to mask invalid points for prediction
queries=sample.query_point[i],
cmap_name="plasma"
)
visualizer.save_recording(output_dir / f"visualization_{dataset_name}" / f"{step_id}_{batch_idx}_{i}.rrd")
@hydra.main(config_path="configs", config_name="test", version_base="1.3")
def main(cfg: DictConfig):
setup_logger()
os.environ["TOKENIZERS_PARALLELISM"] = "false"
if get_rank() == 0:
logger.info("Config:\n%s", OmegaConf.to_yaml(cfg))
torch.backends.cudnn.enabled = True
torch.backends.cudnn.benchmark = True
torch.backends.cudnn.deterministic = True
train_tester = TrainTester(cfg)
# torch.cuda.set_sync_debug_mode(1)
if cfg.get("profile", False):
if cfg.train.num_workers > 0:
logger.warning("Profile is not supported with num_workers > 0, so we manually set it to 0. This will slow down the training.")
cfg.train.num_workers = 0
cfg.train.prefetch_factor = None
with profiler.profile(activities=[profiler.ProfilerActivity.CPU, profiler.ProfilerActivity.CUDA, profiler.ProfilerActivity.XPU], with_stack=True) as prof:
train_tester.main(collate_fn=SliceData.collate)
print(prof.key_averages(group_by_stack_n=1).table(sort_by="self_cpu_time_total", row_limit=20))
print(prof.key_averages(group_by_stack_n=1).table(sort_by="self_cuda_time_total", row_limit=20))
else:
train_tester.main(collate_fn=SliceData.collate)
if __name__ == "__main__":
main()