Fast, sensitive and accurate integration of single-cell data with Harmony

Multi-sample multi-group scRNA-seq analysis tools

Infers a phylogenetic tree from protein structures

EasyCodeML: A visual tool for analysis of selection using CodeML

An R interface for PHYLIP.

moving migrate version 5.0.6 to migrate-5.0.7 that uses a different build system and has a new PDF library

C++ libraries and STL type containers for manipulating and computing on phylogenetic trees

A modern text editor for the terminal written in Rust

A text editor in ≤1024 lines of code, written in Rust

A terminal-based text editor written in Rust

Julia package for the inference of semi-directed phylogenetic networks under pseudolikelihood model

Posterior summarisation in Bayesian phylogenetics

Terminal based IDE & text editor: easy, powerful and fast

Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language

Code and ressources for genome analysis of the brown hagfish and vertebrate genome duplications

Platforma SDK

Community-provided extensions to Seurat

A pipeline for analysing WGS data on the Dragen

R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data

Convert Seurat objects to 10x Genomics Loupe files.

R toolkit for single cell genomics

An Open Source Machine Learning Framework for Everyone

An interactive Formula 1 race visualisation and data analysis tool built with Python! 🏎️

A real-time F1 dashboard

Functions for identifying and characterizing continuous developmental trajectories in single-cell data.

MUMmer for HPC

wdl wrapper for pipseeker

A organelle de novo genome assembly toolkit