Repository for GreeningLab metabolic marker gene databases

bluetooth mesh chat, IRC vibes

🌊 Julia software for fast, friendly, flexible, ocean-flavored fluid dynamics on CPUs and GPUs

🌊 🦠 🌿 A fast and flexible modelling environment written in Julia for modelling the coupled interactions between ocean biogeochemistry, carbonate chemistry, and physics

Adaptive Test-time Learning and Autonomous Specialization

Data portal client and server for NMDC.

National Microbiome Data Collaborative (NMDC) unified data model

public repo for issues related to NMDC work

Runtime system for NMDC data management and orchestration

Mass spectrometry metadata generation

A repository to that holds the code for the NMDC Submission portal metadata suggestor tool, powered by AI

Library to request information about a location regarding the elevation, soil type, and landuse

Command-line program that scans NMDC database for referential integrity violations

Prototype automation

The NMDC submission schema

This workflow is a replicate of the QA protocol implemented at JGI for Illumina reads

A standardized browser-based spreadsheet editor and validator that can be run offline and locally, which works of of LinkML data specifications.

CLI tool to convert metadata submissions from the NMDC submission portal to DOE user facility Excel templates

Recovered cia.gov/the-world-factbook/about/archives/download/factbook-2020.zip from Internet Archive

A library designed to simplify various research tasks for users looking to leverage the NMDC (National Microbiome Data Collaborative) APIs. The library provides a collection of general-purpose func…

EnviroMS is a workflow for natural organic matter data processing and annotation

bluetooth mesh chat, IRC vibes

Workflow for meta-proteomics analysis

Tools for fetching and processing external schemas, ontologies and metadata records. Includes value set maintenance and some GitHub org exploration.

Jupyter Notebooks demonstrating R and Python-based access to NMDC metadata and data

Workflow for metagenome assembled genomes generation.

Workflow for metagenome assembly