update README

Fix linkage rate tables orientation mode affecting the flow charts

Modify radar chart PDF width and height for performance measures that…

… have an odd number of rows (excluding 1)

Update quarto templates to change how linkage rates for intermediate …

…reports are printed

v1.1.1 - autolink compatible version

update cover page layout

Update written portions of report

Fix bug: did not have abbreviations_data_path defined outside of if s…

…tatement

Left some params calls from Quarto doc in an R file by accident

Bug fix in save_linkage_rate. NULL data_time_period and project_id we…

…ren't being checked