Stars
A theoretical reconstruction of the Claude Mythos architecture, built from first principles using the available research literature.
From annotated genomes to metabolic screening in large scale microbiotas
100+ AI Agent & RAG apps you can actually run — clone, customize, ship.
📑 PageIndex: Document Index for Vectorless, Reasoning-based RAG
A new high-resolution long-read metagenome assembler for even noisy reads
Detecting multi-genome synteny using minimizer graph mapping
The simplest, fastest repository for training/finetuning medium-sized GPTs.
🧠「大模型」2小时完全从0训练64M的小参数LLM！Train a 64M-parameter LLM from scratch in just 2h!
A pipeline for characterising the Human Blood Group and Red Cell Antigens using Oxford Nanopore third-generation sequencing data.
Framework for Interpretable Neural Networks
This repository contains various advanced techniques for Retrieval-Augmented Generation (RAG) systems.
Edit, preview and share mermaid charts/diagrams. New implementation of the live editor.
All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")
Working with the outputs of sourmash in R
PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.
A Python package for pharmacogenomics (PGx) research
MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
A native macOS app that allows users to chat with a local LLM that can respond with information from files, folders and websites on your Mac without installing any other software. Powered by llama.…
HGTector2: Genome-wide prediction of horizontal gene transfer based on distribution of sequence homology patterns.