Neuroimaging analysis and visualization suite

Automatic BIDS architecture

Hub for open-source MR-related software

A Graphical Web MRI Sequence Editor

Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure

fMRI denoising based on deep learning

Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.

Self-hosted AI workspace.

Koma is a GPU-accelerated, Pulseq-compatible framework for simulating Magnetic Resonance Imaging (MRI) acquisitions. The primary focus of this package is to simulate the wide range of scenarios enc…

Open-source office suite pack that comprises all the tools you need to work with documents, spreadsheets, presentations, PDFs, and PDF forms on Windows, Linux, and macOS

Bring projects, wikis, and teams together with AI. AppFlowy is the AI collaborative workspace where you achieve more without losing control of your data. The leading open source Notion alternative.

Private, fast, and honest web browser

Zotero is a free, easy-to-use tool to help you collect, organize, annotate, cite, and share your research sources.

A monitor of resources

Taskwarrior - Command line Task Management

Easily and securely send things from one computer to another 🐊 📦

💥 Blazing fast terminal file manager written in Rust, based on async I/O.

Powerful yet simple to use screenshot software 🖥️ 📸

A community-maintained Python framework for creating mathematical animations.

A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data

Comprehensive and open-source library of analysis tools for MRI of the spinal cord.

Code for performing static, dynamic and real-time shimming using external and internal MRI shim coils

TE-dependent analysis of multi-echo fMRI

MP2RAGE Scripts - T1 map correction & Background noise removal

Code Base of the PhysIO Toolbox for Modeling Physiological Noise in fMRI Data (Paper: https://doi.org/10.1016/j.jneumeth.2016.10.019)

Materials of the ISMRM virtual meeting series dedicated to Pulseq and related projects

MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and appar…

yet another brain plot - beautiful brain visualisations for the cortex, subcortex, and tracts.

A Dockerized python Script to fetch Garmin health data and populate that in a InfluxDB Database, for visualization long term health trends with Grafana