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  • University of Pennsylvania
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@NIAGADS @UPENN-PNGC

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The documentation repository for the dbGaP FHIR API.

Jupyter Notebook 13 4 Updated Mar 31, 2025

Adaptive Parallel PDF Parsing and Resource Scaling Engine

Python 67 16 Updated Dec 17, 2025

NVIDIA Federated Learning Application Runtime Environment

Python 940 261 Updated Jun 15, 2026

A high-performance search engine for large-scale genomic interval datasets

C 20 4 Updated Sep 1, 2021

Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.

Python 156 33 Updated Jun 15, 2026
C++ 44 13 Updated Apr 15, 2026

A streaming multipart parser for Python.

Python 508 88 Updated Jun 4, 2026

Create thumbnails of igv.js visualizations and view them all simultaneously in an interactive, responsive web app.

Vue 2 Updated Jan 22, 2021

A polyglot web converter.

TypeScript 9,175 707 Updated Jan 28, 2026

Chromosome visualization for the web

JavaScript 319 77 Updated May 20, 2025

Tool for query progress monitoring in PostgreSQL

C 160 31 Updated Apr 21, 2026

Plugin to allow the co-existence of the Hierarchical and Faceted Track Selectors in the GMOD JBrowse Genome Browser

JavaScript 7 4 Updated Mar 18, 2019

JBrowse 1.x Plugin Registry

HTML 14 8 Updated Sep 10, 2023

Interactive in-browser track viewer

JavaScript 281 62 Updated Oct 26, 2021

The interactive graphing library for Python ✨

Python 18,606 2,812 Updated Jun 3, 2026

A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

JavaScript 168 31 Updated May 9, 2025

The Python micro framework for building web applications.

Python 71,654 16,878 Updated Jun 10, 2026

A JavaScript library aimed at visualizing graphs of thousands of nodes and edges

TypeScript 12,069 1,621 Updated Jun 9, 2026

A web interface to create custom vector-based visualizations on top of RAWGraphs core

JavaScript 8,973 1,844 Updated Nov 18, 2025

Two Flask web-apps for quickly setting up a SPARQL Endpoint or a LOD app for RDFLib

Python 43 12 Updated Nov 4, 2025