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Question: Receptor Preparation with PDB2PQR + Meeko vs. OpenBabel — CNN Scoring Compatibility

Status: Open.

#348 In gnina/gnina;

· popcola313-eng opened on Jun 2, 2026

A suggestion of gnina output sdf file.

Status: Open.

#347 In gnina/gnina;

· woxun opened on Apr 15, 2026

Gnina now working on MacOSX with GPU support

Status: Open.

#346 In gnina/gnina;

· fnachon opened on Mar 31, 2026

Question reg. covalent docking

Status: Open.

#343 In gnina/gnina;

· ghost opened on Jan 8, 2026

Covalent docking and ligand atom pattern

Status: Open.

#341 In gnina/gnina;

· halx opened on Dec 6, 2025

Compiling gnina on Blackwell on Ubuntu 24.04

Status: Open.

#340 In gnina/gnina;

· sistar2020 opened on Oct 31, 2025

Please consider adding intramol to the output SDFs

Status: Open.

#339 In gnina/gnina;

· nicoladmSB opened on Oct 10, 2025

How to evaluate the binding affinity of Covalent bond?

Status: Open.

#336 In gnina/gnina;

· RJ-Li opened on Aug 29, 2025

New atom types in VINA 1.2 and not in GNINA

Status: Open.

#334 In gnina/gnina;

· hima111997 opened on Aug 23, 2025

openbable cmake issue

Status: Open.

#333 In gnina/gnina;

· willownine opened on Aug 21, 2025

issue while make -j8

Status: Open.

#332 In gnina/gnina;

· willownine opened on Aug 20, 2025

Library Change for Nvidia Tool Extensions

Status: Open.

#331 In gnina/gnina;

· pamochi opened on Jul 24, 2025