Graph-based RAG system for biomedical nutrigenetic knowledge discovery. Enables natural language queries on gene-nutrient interactions, supports personalized nutrition counseling, and runs 100% loc…

Semantic-Quantitative property-graph framework integrating PheKnowLator KG with per-sample TCGA/TARGET multi-omics in ArangoDB.

AI comic and manga translator app/browser extension for automatically translating comics, manga, manhwa, BDs, fumetti, and more in multiple languages and formats (Images, PDF, EPUB, CBR, CBZ etc).

🪨 why use many token when few token do trick — Claude Code skill that cuts 65% of tokens by talking like caveman

A curated collection of fun and creative examples generated with Nano Banana & Nano Banana Pro🍌, Gemini-2.5-flash-image based model. We also release Nano-consistent-150K openly to support the commu…

🚀 An awesome list of curated Nano Banana pro prompts and examples. Your go-to resource for mastering prompt engineering and exploring the creative potential of the Nano banana pro(Nano banana 2) AI…

A Streamlit web app for generating AI images using OpenRouter's API. Features multiple models (FLUX, Gemini, GPT), reference image support, customizable aspect ratios, and automatic saving with met…

Schema and generated objects for biolink data model and upper ontology

REDAC: RNA-seq Expression Data Analysis Chatbot

The repository offers tools for GRPM Nutrigenomics analysis, focusing on missense variants. Includes R scripts, comprehensive annotations, and ProtVar access scripts.

KGX is a Python library for exchanging Knowledge Graphs

A Streamlit-based chatbot application with support for multiple AI providers and specialized assistants.

First metabolite-centric knowledge graph.

Automated molecular docking pipeline for batch processing UniProt proteins and PubChem ligands using AutoDock Vina and Meeko. Zero-setup virtual screening with predefined drug-target pairs

Graph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis

AgentQL is a suite of tools for connecting your AI to the web. Featuring a query language and Playwright integrations for interacting with elements and extracting data quickly, precisely, and at sc…

A simple, easy-to-hack GraphRAG implementation

🧑‍🏫 60+ Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), ga…

paper: https://link.springer.com/chapter/10.1007/978-3-031-78093-6_1

This repo offers a workflow dedicated to utilizing BERTopic for Semantic Graph-based information retrieval in nutrigenomics. It includes Jupyter notebooks on topic modeling and semantic graph creat…

Official repository for "DiffAssemble: A Unified Graph-Diffusion Model for 2D and 3D Reassembly" accepted at CVPR2024

GraphAny: Fully-inductive Node Classification on Arbitrary Graphs

Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations" (Bioinformatics 2020)

A set of Jupyter notebooks implementing simple neural networks described in Michael Nielsen's book.

PyTorch Implementation and Explanation of Graph Representation Learning papers: DeepWalk, GCN, GraphSAGE, ChebNet & GAT.

Hands-On Image Processing with Python, Second Edition, Published by Packt

🤗 smolagents: a barebones library for agents that think in code.

Source code for our wedding website 👫.