Stars
Deep learning framework for proteomics
Open-source C++ and Python module for opening binary timsTOF data files.
An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.
DeepMRM: a targeted proteomics data interpretation tool
A javascript library for diffing text and generating corresponding HTML views
A list of tools on proteomics using deep learning
DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.
pyOpenMS workshop Metabolomics Pre-Processing
Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019"…
DIA-NN - a universal automated software suite for DIA proteomics data analysis.
Integrating precursors' intensity from Spectronaut data
AutoRT: Peptide retention time prediction using deep learning
program for exploring properties of signal peptides
Microsoft PowerToys is a collection of utilities that supercharge productivity and customization on Windows
This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between genes and helps predict the efficacy and selectivity of candi…
Avogadro / avogadro
Forked from cryos/avogadroAvogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible ren…
Protein-compound affinity prediction through unified RNN-CNN
Automatically exported from code.google.com/p/ea-utils
A dependency-free cross-platform swiss army knife for PDB files.
DeepSMILES - A variant of SMILES for use in machine-learning
The Springy physics simulation layout for Cytoscape.js
Autodock/Vina plugin for PyMol by Daniel Seeliger