Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing.

An agentic skills framework & software development methodology that works.

Composable computational-science methodology skills for AI research agents — pre-registration over TDD. A science-domain reimplementation of Superpowers.

SummaryTables Module in Jamovi

Python library for reading tiles from wsi tiff-files.

Python library for converting WSI files to DICOM

An extension that wraps a Spotiflow environment such that WSI can be analyzed using Spotiflow through QuPath.

A QuPath extension with tools made at the BIOP

QuPath extension for Aligning Big Brains and Atlases

The catalog containing QuPath extensions maintained by the BIOP team

Inference code for HoVer-NeXt

An ML Platform for storing, analyzing, and visualizing your data all in the browser.

Image annotation with Python. Supports polygon, rectangle, circle, line, point, and AI-assisted annotation.

Quality Control for LabelMe annotations

Closing the Domain Gap in Biomedical Imaging by In-Context Control Samples

Desktop app to manage markdown knowledge bases

Use Codex from Claude Code to review code or delegate tasks.

MVN — Multivariate Normality Tests for jamovi | 6 MV + 5 UV tests, diagnostic plots, outlier detection

Composite-SEM is a comprehensive module for jamovi designed to estimate, analyze, test, and study linear and multi-group structural equation models.

GLM-OCR: Accurate × Fast × Comprehensive

Official, Anthropic-managed directory of high quality Claude Code Plugins.

MCP server for searching and retrieving Claude Agent Skills using vector search

An agentic Machine Learning Engineer

An end-to-end Data Scientist

A general purpose scientific writer