Robin: A multi-agent system for automating scientific discovery

PaperSpine is a motivation-driven skill for learning from strong academic papers, building a paper’s central argument, and rewriting manuscripts through evidence-aware blueprints, revision matrices…

PDF Parser for AI-ready data. Automate PDF accessibility. Open-source.

收藏的一些经典的历史、政治、心理、哲学、数学、计算机方面电子书(约10万本）

将冰冷的离别化为温暖的 Skill，欢迎加入数字生命1.0！Transforming cold farewells into warm skills? It's giving rebirth era. Welcome to Digital Life 1.0. 🫶

你想蒸馏的下一个员工，何必是同事。蒸馏任何人的思维方式——心智模型、决策启发式、表达DNA。Distill how anyone thinks.

An unappealing collection of Claude Skills and resources.

Turn any AI agent into an AI Scientist. The #1 Agent Skills library for science, used by 160,000+ scientists worldwide. 140 ready-to-use skills plus 100+ scientific databases covering biology, chem…

Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA

Tool for robust segmentation of >100 important anatomical structures in CT and MR images

R Interface to Torch

A python package to quantitate liver histopathology in whole slide images.

R package implementation of Milo for testing for differential abundance in KNN graphs

Self-supervised learning of molecular representations from millions of tandem mass spectra using DreaMS (Nat Biotechnology)

Learn single-cell dynamics using neural differential equations

An R package for single-cell and spatial omics analysis, integration, interpretation, and visualization.

DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and single-cell (Xenium) resolution.

A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic stem and progenitor cells and differentiated populations

A Guide to the Analysis of Spatial Transcriptomics

Code associated with the manuscript Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver

To calculated the spatial distance between spots from the spatial transcriptome data.

Arc Virtual Cell Atlas

Spatiotemporal modeling of spatial transcriptomics

A curated list of resources for using LLMs to develop more competitive grant applications.

西安交通大学学位论文模板（Office）（适用硕士、博士学位）An unofficial Office template for Xi'an Jiaotong University degree thesis (Chinese and English)

📊 A universal enrichment tool for interpreting omics data

🔬 Path to a free self-taught education in Bioinformatics!

A pipeline to locate super-enhancer regions

Integrated workflow to predict super-enhancers and compute feature importance