API for the ZAPP zebrafish toxicology atlas.

FastAPI server backed by the LinkML-generated zebrafish-toxicology-atlas-schema. The previous Flask upload endpoint and the first-pass React/Vite UI are archived under legacy/; neither is wired into the current build.

cd server && uv sync
just dev-api           # http://localhost:8000
curl localhost:8000/health
curl localhost:8000/api/studies

just test runs the pytest suite. just seed reseeds the dev DB (seeding also runs automatically on FastAPI startup unless ZAPP_SKIP_SEED=1).

• Fly.io — fly deploy (uses the top-level Dockerfile + fly.toml).
• GCP Cloud Run — just gcp-ship builds, pushes, and deploys with a GCS-backed volume for the SQLite DB.