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Computer Vision Annotation Tool (CVAT) is a leading platform for building high-quality visual datasets for vision AI. It offers open-source, cloud, and enterprise products, as well as labeling serv…

Python 16,098 3,711 Updated Jun 18, 2026
Jupyter Notebook 1 Updated May 28, 2026

PhysioNet Cardiovascular Signal Toolbox

MATLAB 134 63 Updated Sep 18, 2023
MATLAB 52 25 Updated Apr 14, 2023

Deep learning from videography as a tool for measuring infection in poultry

Jupyter Notebook 3 Updated May 22, 2026

Description of hantavirus cases for the 2026 human outbreak

19 3 Updated Jun 16, 2026

Academic Research Skills for Claude Code: research → write → review → revise → finalize

Python 32,740 2,684 Updated Jun 18, 2026

Accepted JOSS papers

HTML 312 27 Updated Jun 18, 2026

PHOIBLE data and development.

TeX 146 34 Updated Jul 5, 2024

Browser-based utility for phylogenetic tree visualisation.

JavaScript 40 4 Updated Jun 1, 2026

Adaptive parallel tempering for Beast2

Java 12 7 Updated May 12, 2026
TeX 3 Updated Jun 16, 2026

Measure the cross-domain impact of academic research by analyzing citation patterns and semantic similarity using OpenAlex API and ML embeddings

Python 1 Updated Feb 11, 2026

The Journal of Open Source Software

Ruby 1,877 208 Updated Jun 16, 2026

Research Software Engineering Plugins for Coding Agents

Python 24 10 Updated Jun 17, 2026
Python 273 37 Updated Aug 1, 2025

Pretrained spoken language classifiers from audio.

Python 10 2 Updated Jan 21, 2021

DevOps with Docker course by the University of Helsinki, Course material

JavaScript 169 337 Updated Feb 12, 2026

Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language

C++ 86 29 Updated Jun 5, 2026

A dependency-free large (+2500) collection of colormaps and palettes for Python 🎨

Python 475 13 Updated Jan 26, 2026

Library for analyzing and manipulating phylogenetic trees

Python 16 2 Updated Apr 4, 2026

Interface to use R from Python

Python 694 83 Updated Mar 26, 2026

Fast floating point to string conversion

Rust 700 40 Updated Feb 16, 2026

📈 benchmarking different ways to concatenate strings in rust

Rust 318 21 Updated Oct 28, 2023

rSPR is a software package for calculating rooted subtree-prune-and-regraft distances and rooted agreement forests.

C++ 12 9 Updated Jan 2, 2024

Repository for the phylo2vec workshop

Python 2 3 Updated Jan 6, 2026

A LaTeX class for Horizon Europe RIA and IA grant proposals

TeX 16 7 Updated Aug 17, 2025

Development & validation of clinical early warning models using multi-centred data.

R 3 1 Updated Dec 12, 2025
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