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Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Python 1,026 355 Updated Aug 24, 2024

Python package with helper tools for the nf-core community.

Python 292 224 Updated Feb 17, 2026

The Ensembl Core Perl API and SQL schema

Perl 83 78 Updated Jan 27, 2026

Aggregate results from bioinformatics analyses across many samples into a single report.

JavaScript 1,419 652 Updated Jan 15, 2026

Official git repository for Biopython (originally converted from CVS)

Python 4,904 1,865 Updated Feb 12, 2026

Tools (written in C using htslib) for manipulating next-generation sequencing data

C 1,845 609 Updated Feb 13, 2026

Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/

Nextflow 19 7 Updated Mar 24, 2019