Starred repositories
A Python implementation of the original DI domain caller
Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
dcHiC: Differential compartment analysis for Hi-C datasets
R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes
Package for analysis and characterization of differential TADs
AI Agent Engineering Platform built on an Open Source TypeScript AI Agent Framework
A collection of 100+ specialized Claude Code subagents covering a wide range of development use cases
An R package for fast topic inference to identify tissue architecture in multiplexed images
A web tool to do automatic spots detections and positional adjustments for Spatial Transcriptomics Datasets.
The largest open-source medical AI skills library for OpenClaw🦞.
The awesome collection of OpenClaw skills. 5,400+ skills filtered and categorized from the official OpenClaw Skills Registry.🦞
UCASpatial: Ultra-precision deconvolution of spatial transcriptomics data
A novel method for RNA edting investigation using scRNA-seq
Fine-grained Spatial Transcriptomics by integrating paired histology image
Gene regulatory network containing signed transcription factor-target gene interactions
Compound ranking predictions from gene expression signatures using ensemble neural network models.