Prepare tagging 1.0.1 (#195)

* Lift GPU restrictions on using typical values for chemistry.

* Fix fuelName handling.

* Update release_notes in preparation for 1.0.1

* Skip ReSetTolODE on GPU. Used to set the global user_data used on CPU.

* Update submodules to match release notes.

* Start implementing ParallelFor(MF).

* Need to pass class indices into lambdas.

* Missing one.

Update and rename RELEASE_NOTES to RELEASE_NOTES.md

Tagged commit for ADSE14-10