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  1. gatk_variantCalling gatk_variantCalling Public

    This repository contains a whole-genome sequencing (WGS) variant calling pipeline built using GATK Best Practices, designed for SNP and INDEL detection from raw sequencing data.

    Shell 2

  2. mirnaAnalysis mirnaAnalysis Public

    This repository contains a miRNA-seq analysis pipeline developed for the meta-analysis of publicly available gastric cancer datasets, aimed at identifying candidate miRNAs with potential for early …

    HTML 1

  3. QTL_Heterosis_Bjuncea_PhD QTL_Heterosis_Bjuncea_PhD Public

    This repository is for keeping a backup of all the codes used in my PhD thesis work.

    R

  4. ChIP-seq_pairedend ChIP-seq_pairedend Public

    This repository contains a ChIP-seq/DAP-seq analysis pipeline for processing raw sequencing data through quality control, alignment, peak calling, and downstream analysis.

    Shell 1