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Weasis is a web-based DICOM viewer for advanced medical imaging and seamless PACS integration.

Java 1,221 355 Updated Apr 15, 2026

Remarkable - The Markdown Editor for Linux http://remarkableapp.github.io

Python 2,031 226 Updated Sep 22, 2024

CodiMD - Realtime collaborative markdown notes on all platforms.

JavaScript 10,043 1,120 Updated Oct 2, 2025

LaTeX files for the Deep Learning book notation

TeX 1,867 379 Updated May 8, 2023

🔬 Monte Carlo simulation toolkit for bioimaging systems

Python 7 4 Updated Apr 13, 2026

python optics module

Python 539 139 Updated Apr 14, 2025

Optical raytracing based on Python

Python 202 40 Updated Jun 26, 2021

Cross-platform, customizable ML solutions for live and streaming media.

C++ 34,808 5,921 Updated Apr 18, 2026

Lean 3's obsolete mathematical components library: please use mathlib4

Lean 1,664 290 Updated Jun 28, 2024

OMERO plugin for metadata manipulation https://www.openmicroscopy.org/omero/

Python 10 13 Updated Apr 1, 2025

StarDist - Object Detection with Star-convex Shapes

Python 1,204 268 Updated Feb 14, 2026

OMERO Docker compose example

Shell 28 34 Updated Dec 6, 2025

Companion site for the textbook Quantum Computing: An Applied Approach

Jupyter Notebook 911 236 Updated Dec 3, 2023

This repository is outdated and new Boost Note app is available! We've launched a new Boost Note app which supports real-time collaborative writing. https://github.com/BoostIO/BoostNote-App

JavaScript 16,945 1,449 Updated Apr 19, 2023

The Visual Thinking tool for Understand Problems, Design Solutions and Express Knowledge.

C# 155 47 Updated Feb 9, 2025

Boost Note is a document driven project management tool that maximizes remote DevOps team velocity.

TypeScript 4,044 406 Updated Mar 17, 2026

MultiModal Big Image Data Sharing and Exploration

19 2 Updated Jan 13, 2023

HedgeDoc - Ideas grow better together

TypeScript 7,095 552 Updated Apr 16, 2026

Jupyter Notebooks for the Image Data Resource

Jupyter Notebook 19 20 Updated Feb 20, 2026

Open scientific N-dimensional image processing 🔬 🎇

Java 1,362 342 Updated Aug 12, 2025

ImJoy: Deep Learning Made Easy!

JavaScript 190 34 Updated Oct 12, 2023

Etherpad: A modern really-real-time collaborative document editor.

TypeScript 18,247 3,011 Updated Apr 19, 2026

Build your personal knowledge base with Trilium Notes

TypeScript 35,623 2,360 Updated Apr 19, 2026

This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biological imaging.

Jupyter Notebook 135 46 Updated Apr 9, 2020

Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

JavaScript 342 60 Updated Apr 7, 2026

A minimal Zarr image viewer based on Viv.

TypeScript 190 39 Updated Apr 16, 2026

Deep learning PyTorch library for time series forecasting, classification, and anomaly detection (originally for flood forecasting).

Python 2,277 304 Updated Feb 9, 2026

A unified framework for machine learning with time series

Python 9,737 2,114 Updated Apr 18, 2026

In-browser literate notebooks

TypeScript 1,349 109 Updated Mar 8, 2024

Literate scientific computing and communication for the web

JavaScript 1,500 145 Updated Jan 6, 2023
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