10x Genomics analysis guides files

Predictive kmer models for development use

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3

An Efficient RML-Compliant Engine for Knowledge Graph Construction

Materials for the RStudio joint webinar with Appsilon Data Science 'Enabling Your Distributed Data Science Team'

Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data

[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

my notes for scATACseq analysis

📜 🎉 Automated reporting of objects in R

Effect size measures and significance tests

This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are also organized in Dockstore in the GATK Best Practices Workflo…

Official code repository for GATK versions 4 and up

Rmd source files for the HarvardX series PH525x

Bioconductor facilities for parallel evaluation

Training material for intermediate R / Bioconductor courses

Course material for introductory R / Bioconductor courses

Contribute Packages to Bioconductor

[DEPRECATED] Docker containers for Bioconductor

Estimating time of HIV-1 infection from next-generation sequence diversity (code and data)

IDEEL pipelines for next-generation sequence quality control and analysis

Next-generation PRALINE sequence alignment program.

A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.

Locate, error-correct, trim, and organize (hierarchically) sequence-tagged next-generation DNA reads

Mycobacterium tuberculosis next generation sequence analysis