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Showing results

Adaption of DINO for computational pathology

Python 6 1 Updated Nov 26, 2024

Apache Parquet Java

Java 3,046 1,522 Updated Apr 2, 2026

Prov-GigaPath: A whole-slide foundation model for digital pathology from real-world data

Python 590 97 Updated May 16, 2025

SimCLRv2 - Big Self-Supervised Models are Strong Semi-Supervised Learners

Jupyter Notebook 4,473 661 Updated May 22, 2023

A graph-transformer for whole slide image classification

Python 181 37 Updated Jun 17, 2024

modular & open DIA search

Jupyter Notebook 106 11 Updated Apr 2, 2026

Open source tools for computational pathology - Nature BME

Python 1,648 494 Updated Apr 14, 2025

A diaPASEF spectrum-centric analysis tool

13 2 Updated Mar 23, 2026
Rust 7 Updated Oct 8, 2024

KD-Tree Implementation in Java via http://www.cs.wlu.edu/~levy/software/kd/

Java 17 7 Updated Oct 26, 2010

Geo Assist is a spatial library to manage spatial data in-memory.

Java 214 21 Updated May 2, 2023

The modern Java bytecode editor

Java 7,073 519 Updated Apr 1, 2026

Java class to draw a heat map in a JPanel

Java 13 9 Updated Sep 24, 2015

The detection of peaks and valleys in a 1d-vector or 2d-array (image)

Jupyter Notebook 286 38 Updated Aug 31, 2025

The official repository for ROOT: analyzing, storing and visualizing big data, scientifically

C++ 3,158 1,509 Updated Apr 2, 2026

The repository for Targeted Feature Detection and Extraction (TFD/E).

Jupyter Notebook 7 4 Updated May 19, 2025

A large collection of JavaFX examples demonstrating basic + advanced features of JavaFX.

Java 548 100 Updated Jul 22, 2024

Framework-agnostic implementation for state-of-the-art saliency methods (XRAI, BlurIG, SmoothGrad, and more).

Jupyter Notebook 994 195 Updated Mar 20, 2024

Neural network visualization toolkit for tf.keras

Python 338 47 Updated Mar 12, 2025

Apply transfer learning of EfficientNet to a custom regression problem with Keras and TensorFlow 2.

Python 34 19 Updated Nov 22, 2022

An implementation of Grad-CAM with keras

Python 665 230 Updated Apr 8, 2019

pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning

Python 42 26 Updated Aug 22, 2019

Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.

Python 12,720 1,703 Updated Mar 29, 2026

Color palette package in R inspired by works at the Metropolitan Museum of Art in New York

R 1,239 85 Updated Jan 3, 2025

Java bindings for TensorFlow

Java 923 224 Updated Mar 20, 2026

A fast and easy to use linear algebra library written in Java for dense, sparse, real, and complex matrices.

Java 612 121 Updated Mar 25, 2026

The missing Java distribution of native C++ libraries

Java 2,838 750 Updated Mar 23, 2026

CLAHE (Contrast Limited Adaptive Histogram Equalization)

Python 8 2 Updated Nov 23, 2021

common method to enhance some cbct image

Jupyter Notebook 33 5 Updated Mar 18, 2021

Fast and flexible image augmentation library. Paper about the library: https://www.mdpi.com/2078-2489/11/2/125

Python 15,293 1,709 Updated Jun 25, 2025
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