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5 stars written in Java
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A quality control analysis tool for high throughput sequencing data

Java 589 113 Updated Mar 20, 2026

Automatically exported from code.google.com/p/figtree

Java 461 118 Updated Mar 20, 2026

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation

Java 263 77 Updated Dec 19, 2025

MinHash Alignment Process (MHAP, pronounced MAP): locality-sensitive hashing to detect long-read overlaps and utilities

Java 98 12 Updated Jun 27, 2022

TGS scaffolding

Java 47 7 Updated Nov 19, 2021