Commits

Branch selector

devel

User selector

All users

All time

Commit history

Commits on Aug 12, 2026

• merged pull request from jeroen; version number bumped to 1.45.4

  UBod

  committed
  8087617View commit details

  Copy full SHA for 8087617

  Browse repository at this point

Commits on Aug 7, 2026

• Merge pull request #43 from jeroen/fix-windows-arm64-knr

  Show description for c863b09
  UBod

  authored
  c863b09View commit details

  Copy full SHA for c863b09

  Browse repository at this point

Commits on Aug 6, 2026

• adapted ClustalOmega makefile for better compatibility on Windows/clang; version number bumped to 1.45.3

  UBod

  committed
  d17a5f9View commit details

  Copy full SHA for d17a5f9

  Browse repository at this point

Commits on Aug 3, 2026

• version bumped to 1.45.2 after fix of link in some help pages

  UBod

  committed
  416162aView commit details

  Copy full SHA for 416162a

  Browse repository at this point

• Merge pull request #44 from hpages/devel

  Show description for 20a7d05
  UBod

  authored
  20a7d05View commit details

  Copy full SHA for 20a7d05

  Browse repository at this point

Commits on Jul 29, 2026

• Fix Rd \link{} targets with missing package anchors

  hpages

  committed
  17c7bd4View commit details

  Copy full SHA for 17c7bd4

  Browse repository at this point

Commits on Jul 28, 2026

• Convert K&R function definitions in hsregex.c to ANSI prototypes for C23 compatibility

  Show description for ffbc2c8
  

  jeroen

  and

  claude

  committed
  ffbc2c8View commit details

  Copy full SHA for ffbc2c8

  Browse repository at this point

Commits on Jun 8, 2026

• Adaptations for BioC 3.24; version number bumped to 1.45.1

  UBod

  committed
  13ac241View commit details

  Copy full SHA for 13ac241

  Browse repository at this point

Commits on May 13, 2026

• Change of format of inst/NEWS file

  UBod

  committed
  97dc2bbView commit details

  Copy full SHA for 97dc2bb

  Browse repository at this point

Commits on Apr 28, 2026

• bump x.y.z version to odd y following creation of RELEASE_3_23 branch

  jwokaty

  committed
  8392896View commit details

  Copy full SHA for 8392896

  Browse repository at this point

• bump x.y.z version to even y prior to creation of RELEASE_3_23 branch

  jwokaty

  committed
  ce990d6View commit details

  Copy full SHA for ce990d6

  Browse repository at this point

Commits on Nov 11, 2025

• fix of seq names for alignments created directly from files; version number bumped to 1.43.1

  UBod

  committed
  5fe136aView commit details

  Copy full SHA for 5fe136a

  Browse repository at this point

Commits on Oct 29, 2025

• bump x.y.z version to odd y following creation of RELEASE_3_22 branch

  jwokaty

  committed
  817cb68View commit details

  Copy full SHA for 817cb68

  Browse repository at this point

• bump x.y.z version to even y prior to creation of RELEASE_3_22 branch

  jwokaty

  committed
  92481b4View commit details

  Copy full SHA for 92481b4

  Browse repository at this point

Commits on Sep 19, 2025

• Removed some files from version controL

  UBod

  committed
  f99034dView commit details

  Copy full SHA for f99034d

  Browse repository at this point

• Further update in DESCRIPTION

  UBod

  committed
  2b38f63View commit details

  Copy full SHA for 2b38f63

  Browse repository at this point

• fix of OpenMP integration; version number bumped to 1.41.3

  UBod

  committed
  944c5a5View commit details

  Copy full SHA for 944c5a5

  Browse repository at this point

Commits on Sep 3, 2025

• pull request from Rong-Zh merged to fix memory leak in Muscle; version number bumped to 1.41.2

  UBod

  committed
  946360dView commit details

  Copy full SHA for 946360d

  Browse repository at this point

• Merge pull request #38 from Rong-Zh/devel

  Show description for 8f150f0
  UBod

  authored
  8f150f0View commit details

  Copy full SHA for 8f150f0

  Browse repository at this point

Commits on Aug 28, 2025

• fixed compilations problems for arm64; version number bumped to 1.41.1

  

  Ulrich Bodenhofer

  authored and

  Ulrich Bodenhofer

  committed
  72ebbc2View commit details

  Copy full SHA for 72ebbc2

  Browse repository at this point

Commits on May 12, 2025

• Fix memory leak

  Rong-Zh

  committed
  464c95bView commit details

  Copy full SHA for 464c95b

  Browse repository at this point

Commits on Apr 15, 2025

• bump x.y.z version to odd y following creation of RELEASE_3_21 branch

  jwokaty

  committed
  0d0db17View commit details

  Copy full SHA for 0d0db17

  Browse repository at this point

• bump x.y.z version to even y prior to creation of RELEASE_3_21 branch

  jwokaty

  committed
  c8c6e34View commit details

  Copy full SHA for c8c6e34

  Browse repository at this point

Commits on Apr 9, 2025

• fix to avoid crash in ClustalOmega code; version number bumped to 1.39.5

  UBod

  committed
  c653d2dView commit details

  Copy full SHA for c653d2d

  Browse repository at this point

• Merge pull request #36 from rualmey/devel

  Show description for cf5e664
  UBod

  authored
  cf5e664View commit details

  Copy full SHA for cf5e664

  Browse repository at this point

Commits on Apr 8, 2025

• fix segfault when doing profile alignment

  rualmey

  committed
  1d388d7View commit details

  Copy full SHA for 1d388d7

  Browse repository at this point

Commits on Apr 7, 2025

• fix of gc; version number bumped to 1.39.4

  UBod

  committed
  12d8245View commit details

  Copy full SHA for 12d8245

  Browse repository at this point

Commits on Apr 3, 2025

• update of gc; some fixes; version number bumped to 1.39.3

  UBod

  committed
  a7b5ecdView commit details

  Copy full SHA for a7b5ecd

  Browse repository at this point

Commits on Feb 14, 2025

• Fixed troubles of 1.39.1, forced C17 standard for ClustalOmega; version number bumped to 1.39.2

  UBod

  committed
  20dabf2View commit details

  Copy full SHA for 20dabf2

  Browse repository at this point

• Fixed troubles of 1.39.1, forced C17 standard for ClustalOmega; version number bumped to 1.39.2

  UBod

  committed
  582fe6dView commit details

  Copy full SHA for 582fe6d

  Browse repository at this point

Commits on Feb 11, 2025

• update of SystemRequirements; version number bumped to 1.39.1

  UBod

  committed
  460411cView commit details

  Copy full SHA for 460411c

  Browse repository at this point

Commits on Oct 29, 2024

• bump x.y.z version to odd y following creation of RELEASE_3_20 branch

  jwokaty

  committed
  76c1c29View commit details

  Copy full SHA for 76c1c29

  Browse repository at this point

• bump x.y.z version to even y prior to creation of RELEASE_3_20 branch

  jwokaty

  committed
  0f52653View commit details

  Copy full SHA for 0f52653

  Browse repository at this point

Commits on Aug 23, 2024

• Change of msaPrettyPrint() interface to allow for workaround around texi2dvi() problems; version number bumped to 1.37.4

  UBod

  committed
  c3ecf29View commit details

  Copy full SHA for c3ecf29

  Browse repository at this point

Commits on Aug 22, 2024

• Major bug fix in Muscle interface; version number bumped to 1.37.3

  UBod

  committed
  cb29773View commit details

  Copy full SHA for cb29773

  Browse repository at this point