Hello,
I have run this command
LongGF flnc.bam Homo_sapiens.GRCh37.75.gtf 100 50 200 > LongGF.run.on.flnc.data.log
on data given from your article (https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-020-07207-4 Reference 62). And it did not return any fusions nor did grep find the "SumGF" in the file. We tried this on a consensus sequence that should have worked but that also did not return any fusions or a "SumGF".
If you can help me understand the problem I am having please let me know.
Thank you for your time,
Syed
Hello,
I have run this command
LongGF flnc.bam Homo_sapiens.GRCh37.75.gtf 100 50 200 > LongGF.run.on.flnc.data.logon data given from your article (https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-020-07207-4 Reference 62). And it did not return any fusions nor did grep find the "SumGF" in the file. We tried this on a consensus sequence that should have worked but that also did not return any fusions or a "SumGF".
If you can help me understand the problem I am having please let me know.
Thank you for your time,
Syed