Stars
A single CLAUDE.md file to improve Claude Code behavior, derived from Andrej Karpathy's observations on LLM coding pitfalls.
⚡ TabPFN: Foundation Model for Tabular Data ⚡
A cross-platform desktop All-in-One assistant for Claude Code, Codex, OpenCode, OpenClaw, Gemini CLI & Hermes Agent. Only official website: ccswitch.io
Integrating histology and spatial transcriptomics - NeurIPS 2024
An Agentic Framework for Reflective PowerPoint Generation
R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
A library for efficient similarity search and clustering of dense vectors.
LIANA+: an all-in-one framework for cell-cell communication
Unified knowledge-driven network inference from omics data
Open-source data lakehouse for biology. Query, trace & validate with a lineage-native lakehouse that supports bio-formats, registries & ontologies. 🍊YC S22
https://interp-extrap-perturb.readthedocs.io
Artificial intelligence (AI, ML, DL) performance metrics implemented in Python
Single-cell perturbation effects prediction benchmark
[AAAI 2025] Dynamic Protein Data Bank
图深度学习（葡萄书），在线阅读地址： https://datawhalechina.github.io/grape-book
Haplotype-aware CNV analysis from single-cell RNA-seq, ATAC-seq, and multiome
A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing
User friendly and accurate binder design pipeline
Machine Learning Yearning 中文版 - 《机器学习训练秘籍》 - Andrew Ng 著
Cell type annotation for single-cell RNA-seq using multi-LLM consensus
Official repository for the ProteinGym benchmarks
Official repository for the Boltz biomolecular interaction models
Making Protein folding accessible to all!
State is a machine learning model that predicts cellular perturbation response across diverse contexts