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readme_and_act Public
an action to display recent activity on your profile, python-based
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modkit Public
Forked from nanoporetech/modkitA bioinformatics tool for working with modified bases
Rust Other UpdatedNov 7, 2025 -
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FunctionalHomologyWorkshop Public
Forked from DavidGraber/FunctionalHomologyWorkshop -
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htseq-clip Public
Forked from EMBL-Hentze-group/htseq-clipa toolset designed for the processing and analysis of eCLIP/iCLIP dataset
Python MIT License UpdatedJul 4, 2025 -
scNMT_notebooks Public
notebooks used for generating downstream scNMT analysis
Jupyter Notebook UpdatedMay 28, 2025 -
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snakemake Public
Forked from snakemake/snakemakeThis is the development home of the workflow management system Snakemake. For general information, see
Python MIT License UpdatedMar 14, 2025 -
github-activity-readme Public
Forked from jamesgeorge007/github-activity-readmeUpdates README with the recent GitHub activity of a user
JavaScript MIT License UpdatedFeb 22, 2025 -
deepTools Public
Forked from deeptools/deepToolsTools to process and analyze deep sequencing data.
Python Other UpdatedNov 21, 2024 -
UMI4Cats Public
Forked from Pasquali-lab/UMI4CatsAn R package for analyzing UMI-4C chromatin contact data.
R UpdatedOct 30, 2024 -
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snakemake-pairtools-phased Public
Forked from caballero/snakemake-pairtools-phasedPython UpdatedAug 9, 2024 -
HiCExplorer Public
Forked from deeptools/HiCExplorerHiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
Python GNU General Public License v3.0 UpdatedJun 28, 2024 -
pyBigWig Public
Forked from deeptools/pyBigWigA python extension for quick access to bigWig and bigBed files
C MIT License UpdatedJun 18, 2024 -
Advanced_analytics_KUL Public archive
Repository for KUL course advanced analytics in Business
Jupyter Notebook UpdatedMay 25, 2024 -
RATTLE Public archive
Forked from comprna/RATTLEReference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing
C++ GNU General Public License v3.0 UpdatedMar 20, 2024 -
snakemake-executor-plugin-slurm Public
Forked from snakemake/snakemake-executor-plugin-slurmA Snakemake executor plugin for submitting jobs to a SLURM cluster
Python MIT License UpdatedMar 12, 2024 -
HiC-Pro Public
Forked from nservant/HiC-ProHiC-Pro: An optimized and flexible pipeline for Hi-C data processing
Python Other UpdatedJan 26, 2024 -
gimmemotifs Public
Forked from vanheeringen-lab/gimmemotifsSuite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.
Python MIT License UpdatedDec 19, 2023 -
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pycoQC Public
Forked from a-slide/pycoQCpycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)
Python GNU General Public License v3.0 UpdatedNov 6, 2023 -
github-actions Public
Forked from deeptools/github-actionsPlay around with github actions
JavaScript MIT License UpdatedMar 15, 2023 -
LCD-show Public
Forked from goodtft/LCD-show2.4" 2.8"3.2" 3.5" 5.0" 7.0" TFT LCD driver for the Raspberry PI 3B+/A/A+/B/B+/PI2/ PI3/ZERO/ZERO W
C++ UpdatedDec 8, 2022 -
py2bit Public
Forked from deeptools/py2bitA python library for accessing 2bit files
C MIT License UpdatedJul 29, 2022 -
slurmgoggles Public
Forked from bethgelab/slurm-monitoring-publicMonitor your high performance infrastructure configured over slurm using TIG stack
Python MIT License UpdatedApr 26, 2022 -
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