Stars
⚽ Football scores for hackers. 💻 A command line interface for all the football scores.
Code for the book Grokking Algorithms (https://www.amazon.com/dp/1633438538)
Workshops on Pandas, data tidying, and visualisation
Improving Public Access to Aggregate Content of ClinicalTrials.gov
Python ClinicalTrials.gov analysis. With graphs!
List of gene lists for genomic analyses.
A collection of small bash scripts for heavy terminal users
Script to send an email when a price drops below a given value (tested on Amazon).
Data of the IPython Cookbook, Second Edition, by Cyrille Rossant, Packt Publishing 2018
A sample Jupyter notebook with Binder & Colab integration
An experimental tool that stores and visualizes local versioning in JupyterLab
Vidjil -- High-throughput Analysis of V(D)J Immune Repertoire (mirror, please go to http://gitlab.vidjil.org)
A pipeline for complete and accurate recovery of TCR repertoires from high throughput sequencing data.
This script use to analyze the immune repertoire sequenced by high throughtput sequencing
Create and maintain phylogenetic "reference packages" of biological sequences.
Scripts to Analyze DTC Sequencing and Genotyping Data (and some comparisons to Veritas WGS data)
👩💻👨💻 Awesome cheatsheets for popular programming languages, frameworks and development tools. They include everything you should know in one single file.
A list of deep learning implementations in biology
Machine Learning for Biologists
A sequence analysis tool to detect emergent, rare mutations in sub-sets of cell populations
Simple scripts for handling Unique Molecular Indexes in Fastq and Bam files
Versatile open-source tool for microbiome analysis
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
MutClustSW: Identifying local clusters of mutation hotspots in cancer-related genes and their biological relevance