fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisit…

Processing tools for magnetic resonance images of infant brains

Workflows and interfaces for neuroimaging packages

Code for figures and analysis for infant-fMRIprep paper

Python package to access BIDS datasets

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcesssing tools)

The NiPreps' Reporting and Visualization system - report templates and "reportlets"

Common workflows for MRI (anatomical, functional, diffusion, etc)

A free and open platform for analyzing and sharing neuroimaging data

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes

a standalone fork of nipy/nibabel#656

pathlib api extended to use fsspec backends

The NiPreps landing page

A python client to query TemplateFlow via pyBIDS

Learn Nipype with these tutorial notebooks - go here to see them online -->

Python package to access a cacophony of neuro-imaging file formats

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

A conversion tool for creating NDA compatible metadata representation from BIDS datasets.

Repository to prepare HeuDiConv paper

Poldracklab guide

Having to do a re-build of the docker image which we use for this, making an additionally git repo to track changes.

Machine learning for NeuroImaging in Python

A package for publication-ready brain surface figures

Python/JavaScript library for communicating over WebSocket