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7 stars written in Perl
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A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.

Perl 347 85 Updated Apr 12, 2023

TransDecoder source

Perl 302 64 Updated Mar 22, 2026

💾 📃 "Reads to report" for public health and clinical microbiology

Perl 142 38 Updated Dec 9, 2025

MITObim - mitochondrial baiting and iterative mapping

Perl 115 34 Updated Dec 29, 2020
Perl 37 9 Updated Jun 12, 2023

CWL-based automated bioinformatics workflow for PacBio and Illumina data

Perl 6 7 Updated Apr 23, 2021

Interface to Debian DEP 12 format

Perl 1 1 Updated Sep 26, 2024