Description of feature
Hello,
As per the request on slack, I was wondering if the addition of Fastplong for Nanopore read QC would be of value? It will expedite the read QC workflow as it is significantly faster than Porechop and is a tool still under active development.
It could also replace Filtlong for length filtering, further reducing compute time, but it does not have a similar downsampling by length/quality setting as is used by default currently.
https://github.com/OpenGene/fastplong/
Description of feature
Hello,
As per the request on slack, I was wondering if the addition of Fastplong for Nanopore read QC would be of value? It will expedite the read QC workflow as it is significantly faster than Porechop and is a tool still under active development.
It could also replace Filtlong for length filtering, further reducing compute time, but it does not have a similar downsampling by length/quality setting as is used by default currently.
https://github.com/OpenGene/fastplong/