Search results

Add <code>gunc_checkm_summary.tsv</code> table to `bin_summary.tsv

enhancementNew feature or requestNew feature or request

Status: Open.

#982 In nf-core/mag;

· jfy133 opened on Feb 13, 2026

If all BIN QC tools fail, the pipeline should stop and not attempt to run downstream steps

bugSomething isn't workingSomething isn't working

Status: Open.

#981 In nf-core/mag;

· jfy133 opened on Feb 11, 2026

Add DeepMAsED to the pipeline

enhancementNew feature or requestNew feature or request

Status: Open.

#980 In nf-core/mag;

· amizeranschi opened on Feb 11, 2026

BOWTIE2_ASSEMBLY_ALIGN fails with samtools "-@" option under conda profile

bugSomething isn't workingSomething isn't working

Status: Open.

#978 In nf-core/mag;

· Ruiqi-CUB opened on Feb 8, 2026

AWS megatest configuration suboptimal

bugSomething isn't workingSomething isn't working

Status: Open.

#977 In nf-core/mag;

· jfy133 opened on Feb 6, 2026

ALE should not be executed with long read data

bugSomething isn't workingSomething isn't working

Status: Open.

#974 In nf-core/mag;

· jfy133 opened on Feb 4, 2026

Add dedicated parameters for Trimmomatic adapter clipping

enhancementNew feature or requestNew feature or request

Status: Open.

#971 In nf-core/mag;

· Pranjal-Bioinfo opened on Jan 27, 2026

NFCORE_MAG:MAG:BUSCO_QC:BUSCO_SUMMARY terminated with an error exit status (1)

bugSomething isn't workingSomething isn't working

Status: Open.

#968 In nf-core/mag;

· mglgc opened on Jan 26, 2026

Count table after mapping reads back to the dereplicated MAGs

enhancementNew feature or requestNew feature or request

Status: Open.

#955 In nf-core/mag;

· richrr opened on Dec 3, 2025

Better document BUSCO run by default, and how to turn it off

enhancementNew feature or requestNew feature or request

Status: Open.

#951 In nf-core/mag;

· jfy133 opened on Dec 2, 2025

NFCORE_MAG:MAG:BINNING:COMEBIN_RUNCOMEBIN: corruption of 638 bytes: Error in middle of record

bugSomething isn't workingSomething isn't working

Status: Open.

#950 In nf-core/mag;

· tkcaccia opened on Dec 2, 2025

GPU acceleration for COMEBin and SemiBin2

enhancementNew feature or requestNew feature or request

Status: Open.

#936 In nf-core/mag;

· d4straub opened on Nov 19, 2025