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Commits on Dec 9, 2025

• fix: Added support for the `bwamem` aligner in the AWS full test workflow configuration, ensuring compatibility with both CPU and ARM compute environments.

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Commits on Dec 4, 2025

• chore: update GPU snapshot workflow versions

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Commits on Nov 26, 2025

• update nf-test gpu nxf_ver to 25.4.0

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• update nf-test-gpu nxf ver to 25.04.0

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• Merge branch 'TEMPLATE' of https://github.com/nf-core/methylseq into merging-template-updates-3.5.1

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Commits on Nov 20, 2025

• Template update for nf-core/tools version 3.5.1

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Commits on Nov 5, 2025

• fix lint issues from new template

  

  Eduard Casas

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  Eduard Casas

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Commits on Oct 16, 2025

• Template update for nf-core/tools version 3.4.1

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Commits on Jul 28, 2025

• ci: Run wave on arm tests

  edmundmiller

  committed
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• Fix typo in bismark_align.config to correctly reference known splices parameter

  sateeshperi

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• Add GitHub Action to automate GPU snapshot updates on issue comments

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Commits on Jul 27, 2025

• mv multiqc llms-full-text to nftignore

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• update snapshot post module updates

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  committed
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Commits on Jul 26, 2025

• ci: bump Nextflow version to 24.10.5 and update job naming conventions in nf-test workflow

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• Merge branch 'nf-core-template-merge-3.3.2' into dev

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Commits on Jul 24, 2025

• ci: Add labels to runs

  edmundmiller

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• ci: add parameter validation step to AWS megatests workflow

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  claude

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• ci: Switch to vars

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• ci: update AWS megatests workflow to use new CE org variables

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  edmundmiller

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Commits on Jul 8, 2025

• Template update for nf-core/tools version 3.3.2

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Commits on Jul 3, 2025

• add gpu test_full run to awsfulltest.yml

  sateeshperi

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• apply suggestions from code review

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Commits on Jun 5, 2025

• Merge branch 'nf-core-template-merge-3.3.1' into dev

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  committed
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Commits on Jun 3, 2025

• Template update for nf-core/tools version 3.3.1

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Commits on May 29, 2025

• nf-core-template-merge-3.2.1 merge

  sateeshperi

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Commits on May 24, 2025

• Added CUDA test for runsOn

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Commits on Apr 30, 2025

• Template update for nf-core/tools version 3.2.1

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Commits on Apr 15, 2025

• Apply suggestions from code review

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  sateeshperi

  and

  mashehu

  authored
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• update ci runners to runson

  sateeshperi

  committed
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Commits on Mar 25, 2025

• update min nxf ver to 24.10.2

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Commits on Feb 4, 2025

• Merge branch 'nf-core-template-merge-3.2.0' of github.com:nf-core/methylseq into dev

  sateeshperi

  committed
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Commits on Jan 27, 2025

• Template update for nf-core/tools version 3.2.0

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Commits on Jan 20, 2025

• Template update for nf-core/tools version 3.1.2

  nf-core-bot

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Commits on Dec 13, 2024

• updates after template merge

  sateeshperi

  committed
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Commits on Dec 12, 2024

• Template update for nf-core/tools version 3.1.0

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