Conda recipes for the bioconda channel.

Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).

This is the development home of the workflow management system Snakemake. For general information, see

A port of biocommons/hgvs to the Rust programming language

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

Safe rust bindings to the Highs MILP Solver.

Utilities for building and managing bioconda recipes

Bioinformatics I/O libraries in Rust

Permutect, an incredibly efficient deep learning architecture for somatic and germline variant calling

The next version of bwa-mem

Tumor Mutational Burden

A static analysis toolkit for the Workflow Description Language

Publish Rust crates from CI with a Release PR.

SeqAn's official repository.

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

Convert variants from VarDict/VarDictJava into VCF v4.2 format.

Quality of life improvements for Bioinformatics in Python.

Track your Claude.ai usage right from your Mac menu bar

A Snakemake executor plugin for AWS Batch

TypeScript/JavaScript SDK for MonarchMoney's GraphQL API with comprehensive authentication, caching, and rate limiting

A conda-smithy repository for mupdf.

MkDocs plugin to programmatically generate documentation pages during the build

A conda-smithy repository for pymupdf.

A C/C++ library for fast interval overlap queries (with a "bedtools coverage" example)