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TIR-Learner: error: unrecognized arguments: -p 16

Status: Open.

#633 In oushujun/EDTA;

· rsandean opened on Jun 4, 2026

TIR-Learner step crashes with KeyError: 0 due to Pandas 2.0+ incompatibility

Status: Open.

#631 In oushujun/EDTA;

· lorenzopenone opened on May 22, 2026

EDTA stopped after finding no SINEs

Status: Open.

#625 In oushujun/EDTA;

· beibeiliu1008 opened on Mar 4, 2026

Illegal division by zero in find_flTE.pl during panEDTA run

Status: Open.

#624 In oushujun/EDTA;

· AnaKurdadze opened on Mar 2, 2026

LINE and TIR detection failed while running EDTA on a tapeworm genome (1.20Gb), but the pipeline finished

TIR-LearnerTIR-Learner related issuesTIR-Learner related issues

Status: Open.

#619 In oushujun/EDTA;

· hliu45749-ops opened on Feb 4, 2026

Question about divergence estimation for structurally annotated TIR elements in EDTA

TIR-LearnerTIR-Learner related issuesTIR-Learner related issues

Status: Open.

#618 In oushujun/EDTA;

· C-YONG opened on Feb 4, 2026

the bug of singularity use the edta container，

Status: Open.

#617 In oushujun/EDTA;

· Jiangjiangzhang6 opened on Feb 4, 2026

HelitronScanner not detected when running EDTA, but works for another user with the same script

enhancementNew feature or requestNew feature or request

Status: Open.

#615 In oushujun/EDTA;

· juliagries opened on Jan 21, 2026

result error form panEDTA

Status: Open.

#603 In oushujun/EDTA;

· Xoey0314 opened on Sep 26, 2025

Raw LTR results not found

Status: Open.

#599 In oushujun/EDTA;

· brysonab opened on Sep 8, 2025

Input file "jaw.final.genome.fasta.mod.EDTA.TElib.fa.masked" not found! Resulting in the failure of LTR recognition

Status: Open.

#588 In oushujun/EDTA;

· GUS616123 opened on Jul 7, 2025

Time consumption about EDTA

TIR-LearnerTIR-Learner related issuesTIR-Learner related issues

Status: Open.

#580 In oushujun/EDTA;

· star-lamp opened on Jun 22, 2025